DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and HCM1

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_009991.2 Gene:HCM1 / 850429 SGDID:S000000661 Length:564 Species:Saccharomyces cerevisiae


Alignment Length:509 Identity:113/509 - (22%)
Similarity:185/509 - (36%) Gaps:144/509 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 NKEIV-KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECF 128
            |.|:. ||||||..||.:||..:.:.|:||:.||.:|...||||:.....||||||||||||:.|
Yeast   103 NGELAKKPPYSYATLICLAILQSQEGKLTLSQIYHWIHVHFPYYKQKDASWQNSIRHNLSLNDAF 167

  Fly   129 VKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVM--------------------- 172
            :|.  :....|||.:|.:.|.:...|..|.  .|...|.|..:.                     
Yeast   168 IKT--EKSCDGKGHFWEVRPGAETKFFKGE--NRGYEFVKDSLQDIGKYFEIDSTLDELEQVESG 228

  Fly   173 ---------REKEEAIKRQAMMNEKLAEMKPLKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSG 228
                     .|:|||.|..::         .::|.::.||....: .|....|.:          
Yeast   229 EGNDDLPDEEEREEAGKFPSI---------EIQLNSSPILRVSQL-HHIPQLKTD---------- 273

  Fly   229 KEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDSLMNVYNPRIHHSA--YPYHLN-EDNL-AT 289
                 .::||. |::|..|.::    :|:....:|||...|..:.:|::  .|..:| :|:. |.
Yeast   274 -----NSVLNP-HENLESMRNM----IENDVNNIDSLEPPYVMKKYHTSLGLPSLVNAKDHFQAG 328

  Fly   290 VASSQMHHVHH-----AAAAHHAQQLQRHVAHV---AHPLTP--GGQGAGG--QSSGHSP----- 337
            |.::.:...:.     ..:|...|..:::....   ...|:|  ...|||.  ....:||     
Yeast   329 VKNNNITQANRFNTLPITSAKSPQNFRKYFTSFNSNFEDLSPLRSNVGAGSLLDPLPYSPLKLYD 393

  Fly   338 ----TTISTPHGPAHGGWYTPETPPSEPVPHNGQ-QGTP--THPGHNNNNSSSVLNHNGVGNGGG 395
                ..:|.|.....   |:....|..|..|... ..||  .|........|.:::....||   
Yeast   394 QKNLALMSKPQSQQS---YSNSQLPPPPSSHGSDLLKTPKMRHSDGLEKTPSRLISTPKDGN--- 452

  Fly   396 GGGGGGGGSSSVLTSSPTSALGFRDM----IFEQNQSCQLDTGSPTGSLQSASPPASASVAAASA 456
                      |:|....|.:..|.|:    :|...::......:|.|:|::...|..:|......
Yeast   453 ----------SILRKWQTPSHLFEDLYCSPLFRAIETPIRYITTPGGTLETQISPRKSSAPDVLT 507

  Fly   457 AAAAAVISS-------------------------------HHHHHHHHAALSGN 479
            :|..:..:|                               ||.:|:|.:..|||
Yeast   508 SATNSKFASSGLFGVDVYSVWKRATEKISDGNNTTDSNQKHHPYHNHPSNDSGN 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 41/90 (46%)
HCM1NP_009991.2 COG5025 20..564 CDD:227358 113/509 (22%)

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