DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxc1b

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_571804.1 Gene:foxc1b / 79375 ZFINID:ZDB-GENE-010302-2 Length:433 Species:Danio rerio


Alignment Length:417 Identity:162/417 - (38%)
Similarity:210/417 - (50%) Gaps:77/417 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YAQTAAGYGSASAVAAASSASAAAAAHYAYDQYSRYPYS-ASAYGLGAP-HQNKEIVKPPYSYIA 77
            :.:||.|.|.....|..|.        |::..:.:||.. |.|||..|| .|.|::|||||||||
Zfish    25 FYRTATGGGYTGMPAPMSM--------YSHATHEQYPGGMARAYGPYAPAQQPKDMVKPPYSYIA 81

  Fly    78 LIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGS 142
            ||.|||||::|||:|||||||:||||||:|||||||||||||||||||||||||.||||||||||
Zfish    82 LITMAIQNSSDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGS 146

  Fly   143 YWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLA----EMKPLKLMTNGIL 203
            ||||||||||||:||||||||||||||||:||||:. .||...|...|    ..:|:||..   :
Zfish   147 YWTLDPDSYNMFENGSFLRRRRRFKKKDVLREKEDR-DRQGKDNPGQACEQDAQQPVKLRD---I 207

  Fly   204 EAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDSLMNV 268
            :.::.|....|....||..:......:.|..:..:....|.....          .|::|::|..
Zfish   208 KTENGACTPPHDSTPPLSTVPKTESPDRSGGSACSGSPQSQTPQQ----------AFSMDTIMTG 262

  Fly   269 YNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHA----QQLQRHVAHVAHPLTPGGQGAG 329
            ......|:|   .|.....|...|..:.:......||::    |....|....|..|..|.:|.|
Zfish   263 LRGSPQHAA---ELPASRAALPGSVSLTYSPTPQPAHYSPPCGQPATYHCNMQATSLYTGDRGHG 324

  Fly   330 GQ-----SSGHSPTTISTPHGPAH-----------GGWYTPETPPSEPVPHNGQQG--TPTHPGH 376
            ..     ::..:.::||.||..:.           ..||         :..:|:.|  :.::||.
Zfish   325 DDTLPEYTNTTNASSISHPHQSSSQESQHLQQNRLAPWY---------LNQSGELGHLSASYPGQ 380

  Fly   377 NNN---------------NSSSVLNHN 388
            ..|               |||.|...|
Zfish   381 QQNFHAVREMFETQRIALNSSPVTGSN 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 81/89 (91%)
foxc1bNP_571804.1 FH_FOXC1 69..161 CDD:410818 80/91 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..250 19/79 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..355 7/36 (19%)

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