DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxf1

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001039226.1 Gene:foxf1 / 734087 XenbaseID:XB-GENE-478922 Length:373 Species:Xenopus tropicalis


Alignment Length:375 Identity:115/375 - (30%)
Similarity:156/375 - (41%) Gaps:116/375 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            ||||||||||.||||::..|::||:.|||::..|||::|.:.|||:||:||||||||||:|:.:.
 Frog    54 KPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKG 118

  Fly   135 DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMT 199
            ..:||||.|||:||.|..||:.|||.||.|.|::                   |...:||:..|.
 Frog   119 LGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFRR-------------------KCQALKPMYSMM 164

  Fly   200 NG-----ILEAKHMAAHAAHFKKEP---LMDLGC---------------LSGKEVSHAA------ 235
            ||     |.|.......:......|   .:|.|.               |||..|||.|      
 Frog   165 NGLGFNHIPETYSFQGASGTIACPPNSLSLDSGIGMMNGHLPSNVDGMGLSGHPVSHIAANGGHS 229

  Fly   236 MLNSC----------HDSLAQMNHLAGGGVEHPGFTVDSLMNVYNPRIHHSAYPYHLNEDNLATV 290
            .:.||          |||.:.:  |.||||..|                ||.|            
 Frog   230 YMGSCTGSSGGDYSHHDSGSPL--LGGGGVMEP----------------HSVY------------ 264

  Fly   291 ASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTI--STPHGPAHGGWYT 353
             ||.......:|:..:.:|         .||:|....|...||..|..::  |..|..:|     
 Frog   265 -SSPASAWAPSASTPYIKQ---------QPLSPCNSAANPLSSSLSSHSLDQSYLHQNSH----- 314

  Fly   354 PETPPSEPVPHNGQQGTPTHPGHN---NNNSSSVLNHNGVGNGGGGGGGG 400
              ...||      .||.|.:...:   |:....|.:.|.:.:.....|.|
 Frog   315 --NTASE------LQGIPRYHSQSPSMNDRKEFVFSFNAMASSSMHSGSG 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 53/88 (60%)
foxf1NP_001039226.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..51
FH_FOXF1 55..153 CDD:410823 58/116 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 236..255 4/20 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 283..306 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

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