DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and foxq1

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_002934447.2 Gene:foxq1 / 733448 XenbaseID:XB-GENE-483842 Length:437 Species:Xenopus tropicalis


Alignment Length:125 Identity:62/125 - (49%)
Similarity:87/125 - (69%) Gaps:11/125 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            ||||||||||||||:::|..::||..|..|:|::||::|.:..||:||:|||||||:|||||.||
 Frog   111 KPPYSYIALIAMAIKDSASGRLTLAEINDYLMKKFPFFRGSYTGWRNSVRHNLSLNDCFVKVLRD 175

  Fly   135 DKKP-GKGSYWTLDPDSYNMFDNGSFLRRRRR-------FKKKDVMREKEEAIKRQAMMN 186
            ..:| ||.:||.|:|:|...|.:|.|.|||:|       .|::|:....|:   :..|||
 Frog   176 PSRPWGKDNYWMLNPNSEYTFADGVFRRRRKRLNRVTKCLKEQDLQGLAEQ---QHQMMN 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 50/86 (58%)
foxq1XP_002934447.2 FH_FOXQ1-like 111..189 CDD:410808 46/77 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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