DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxl3

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001419358.1 Gene:Foxl3 / 680273 RGDID:1594158 Length:231 Species:Rattus norvegicus


Alignment Length:160 Identity:77/160 - (48%)
Similarity:95/160 - (59%) Gaps:26/160 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 AASSASAAAAAHYAYDQYSRYPYSASAYGLGAPHQNKEIVKPPYSYIALIAMAIQNAADKKVTLN 94
            ||.:..:.:...:..|...|:..|..: |.|..|||  :.|...|||||||||||.:...:|||:
  Rat    10 AAPTRKSGSQGQHTGDPGGRFQGSHRS-GRGLCHQN--LTKTRESYIALIAMAIQQSPAGRVTLS 71

  Fly    95 GIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVAR---DDKKPGKGSYWT--------LDP 148
            |||.:||.:|||||.|::.||||||||||||.|||||.|   .||  |||:|||        || 
  Rat    72 GIYDFIMRKFPYYRANQRAWQNSIRHNLSLNSCFVKVPRTEGHDK--GKGNYWTFAGGCESLLD- 133

  Fly   149 DSYNMFDNGSFLRRRRRFKKKDVMREKEEA 178
                :|:||:|.|||||...|     .|||
  Rat   134 ----LFENGNFRRRRRRRGPK-----SEEA 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 57/100 (57%)
Foxl3NP_001419358.1 FH_FOX 51..139 CDD:469596 55/94 (59%)

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