DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxe3

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001073150.2 Gene:foxe3 / 570855 ZFINID:ZDB-GENE-061214-6 Length:422 Species:Danio rerio


Alignment Length:356 Identity:113/356 - (31%)
Similarity:159/356 - (44%) Gaps:119/356 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            ||||||||||||||.|:.::|:||.|||::||||||:||:|.:.|||||||||:||:||||:.|:
Zfish   103 KPPYSYIALIAMAIANSPERKLTLGGIYKFIMERFPFYRENSKKWQNSIRHNLTLNDCFVKIPRE 167

  Fly   135 DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMT 199
            ..:||||:||||||.:.:|||||||||||:|||:.||....                        
Zfish   168 PGRPGKGNYWTLDPAAEDMFDNGSFLRRRKRFKRTDVSTYP------------------------ 208

  Fly   200 NGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDS 264
             |.:::      ::.|...|:       |::              |..|.|      :||.|   
Zfish   209 -GYMQS------SSAFTPTPM-------GRQ--------------AYPNTL------YPGVT--- 236

  Fly   265 LMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLT---PGGQ 326
              :.|..::..|.:|             :.:||...:|.....|.....:.::....|   .||.
Zfish   237 --SGYGSQLAGSPHP-------------AMLHHYQASAGVTQGQARMFSIDNIISQQTVMQSGGD 286

  Fly   327 --------GAGGQSSGHSPTTISTPHGPAHGGWYTPETPPSEPVPHNGQQGTPTHPGHNNNNSSS 383
                    |||...:..|..::||                |:|.....|...||         |:
Zfish   287 LNTQSLGLGAGDLGTMTSSCSVST----------------SDPTCFQTQAINPT---------SN 326

  Fly   384 VLNHNGVGNGGGGGGGGGGGSSSVLTSSPTS 414
            :|:.|       .|......:||....||||
Zfish   327 MLSRN-------TGSLASNMTSSYTYPSPTS 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 61/88 (69%)
foxe3NP_001073150.2 COG5025 <14..>182 CDD:227358 55/78 (71%)
FH_FOXE 103..196 CDD:410793 65/92 (71%)

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