DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxf1

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001073655.1 Gene:foxf1 / 566407 ZFINID:ZDB-GENE-050419-153 Length:380 Species:Danio rerio


Alignment Length:429 Identity:127/429 - (29%)
Similarity:176/429 - (41%) Gaps:142/429 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            ||||||||||.||||::..|::||:.|||::..|||::|.:.|||:||:||||||||||:|:.:.
Zfish    52 KPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKG 116

  Fly   135 DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIK--RQAMMN----EKLAEM- 192
            ..:||||.|||:||.|..||:.|||.||.|.|      |.|.:|:|  ..:|||    ..:.|. 
Zfish   117 LGRPGKGHYWTIDPASEFMFEEGSFRRRPRGF------RRKCQALKPSMYSMMNGLGFNHIPESY 175

  Fly   193 -------------KPLKL-----MTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNS 239
                         ..|.|     |.||     |:|::        :..:| |:|..:.|.: .||
Zfish   176 NFQGGGGGLSCPPNSLSLESGIGMMNG-----HLASN--------MEGMG-LAGHSMPHLS-TNS 225

  Fly   240 CHDSLAQMNHLAGGGVEHPGFTVDSLMNVYNPRIHH--SAYPYHLNEDNLATVASSQMHHVHHAA 302
            .|..:....  ...|.|:|               ||  ||.|.      |.:......|.|:.:.
Zfish   226 GHSYMGSCT--GSSGTEYP---------------HHDSSASPL------LTSGGVMDPHAVYSST 267

  Fly   303 AAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTPETP--PSEPVPHN 365
            |:             |.|..|             ||:::      :|..|..:.|  |..|...:
Zfish   268 AS-------------AWPSAP-------------PTSLN------NGTSYIKQQPLSPCNPGASS 300

  Fly   366 GQQGTPTHPGHNNNNSSSVLNHNGVGNGGGGGGGGGGGSSSVLTSSPTSALGFRDMIFEQNQSCQ 430
            .|...|||     :...|.|:.||.|.      ....|.....|.|| |....::.:|..|....
Zfish   301 LQPSLPTH-----SLEQSYLHQNGHGT------TDLQGIPRYHTQSP-SMCDRKEFVFSFNAMTS 353

  Fly   431 LDTGSPTGSLQSASPPASASVAAASAAAAAAVISSHHHH 469
            ....|| ||                        ||::||
Zfish   354 SSMHSP-GS------------------------SSYYHH 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 52/85 (61%)
foxf1NP_001073655.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
FH 52..140 CDD:214627 52/87 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.810

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