DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxf1

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001073655.1 Gene:foxf1 / 566407 ZFINID:ZDB-GENE-050419-153 Length:380 Species:Danio rerio


Alignment Length:429 Identity:127/429 - (29%)
Similarity:176/429 - (41%) Gaps:142/429 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            ||||||||||.||||::..|::||:.|||::..|||::|.:.|||:||:||||||||||:|:.:.
Zfish    52 KPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKG 116

  Fly   135 DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIK--RQAMMN----EKLAEM- 192
            ..:||||.|||:||.|..||:.|||.||.|.|      |.|.:|:|  ..:|||    ..:.|. 
Zfish   117 LGRPGKGHYWTIDPASEFMFEEGSFRRRPRGF------RRKCQALKPSMYSMMNGLGFNHIPESY 175

  Fly   193 -------------KPLKL-----MTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNS 239
                         ..|.|     |.||     |:|::        :..:| |:|..:.|.: .||
Zfish   176 NFQGGGGGLSCPPNSLSLESGIGMMNG-----HLASN--------MEGMG-LAGHSMPHLS-TNS 225

  Fly   240 CHDSLAQMNHLAGGGVEHPGFTVDSLMNVYNPRIHH--SAYPYHLNEDNLATVASSQMHHVHHAA 302
            .|..:....  ...|.|:|               ||  ||.|.      |.:......|.|:.:.
Zfish   226 GHSYMGSCT--GSSGTEYP---------------HHDSSASPL------LTSGGVMDPHAVYSST 267

  Fly   303 AAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTPETP--PSEPVPHN 365
            |:             |.|..|             ||:::      :|..|..:.|  |..|...:
Zfish   268 AS-------------AWPSAP-------------PTSLN------NGTSYIKQQPLSPCNPGASS 300

  Fly   366 GQQGTPTHPGHNNNNSSSVLNHNGVGNGGGGGGGGGGGSSSVLTSSPTSALGFRDMIFEQNQSCQ 430
            .|...|||     :...|.|:.||.|.      ....|.....|.|| |....::.:|..|....
Zfish   301 LQPSLPTH-----SLEQSYLHQNGHGT------TDLQGIPRYHTQSP-SMCDRKEFVFSFNAMTS 353

  Fly   431 LDTGSPTGSLQSASPPASASVAAASAAAAAAVISSHHHH 469
            ....|| ||                        ||::||
Zfish   354 SSMHSP-GS------------------------SSYYHH 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 53/88 (60%)
foxf1NP_001073655.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
FH_FOXF1 53..151 CDD:410823 59/103 (57%)
Blue background indicates that the domain is not in the aligned region.

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