DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxb2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_005162532.1 Gene:foxb2 / 559714 ZFINID:ZDB-GENE-081104-320 Length:318 Species:Danio rerio


Alignment Length:324 Identity:107/324 - (33%)
Similarity:157/324 - (48%) Gaps:70/324 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            |||||||:|.|||||:.::|.:.|:.||::||:||||||:|.|.||||:|||||.|:||:|:.|.
Zfish    13 KPPYSYISLTAMAIQSCSEKMLPLSDIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPRR 77

  Fly   135 DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMT 199
            ..:|||||:|.|.||..:||:||||||||:|||   ::|.:..|.|...:::.            
Zfish    78 PDQPGKGSFWALHPDCGDMFENGSFLRRRKRFK---LLRVEHSACKSSPLLHS------------ 127

  Fly   200 NGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNH-----LAG---GGVE 256
               ..:.|...|:.|........||      |.|...|.    ::.:::|     |:|   |..:
Zfish   128 ---YHSHHHTQHSLHQSHHHSGKLG------VGHPEYLG----TMGRLSHFQSYTLSGGQTGSFK 179

  Fly   257 HPGFTVDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAH---HAQQLQRHVAHVA 318
            || |.::||:......:..|..|           .:|.|||:.:.....   ....:..||..::
Zfish   180 HP-FAIESLIGRDYKGVMASGLP-----------IASVMHHLGYPMPPQLGGMVNSVWPHVGMLS 232

  Fly   319 HPLTPGGQGAGGQSSGHSPTTISTP----HGPAHGGWYTPETP-PSEPVPHNGQQG--TPTHPG 375
            .|:          ||.:.|.:::..    |.|  |....|..| |.:|.|..|...  |...||
Zfish   233 EPV----------SSDYPPFSVAVKGLYHHHP--GTQSLPAVPMPIKPTPTLGTVSSLTAITPG 284

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 54/88 (61%)
foxb2XP_005162532.1 FH_FOXB2 1..110 CDD:410817 61/96 (64%)

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