DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxn2b

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001017555.2 Gene:foxn2b / 550127 ZFINID:ZDB-GENE-050417-1 Length:396 Species:Danio rerio


Alignment Length:189 Identity:57/189 - (30%)
Similarity:80/189 - (42%) Gaps:60/189 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 AQTAAGYGSASAVAAASSASAAAAAHYAYDQYSR------------------------------- 49
            ||.|.|.|:.....:|||..|.     :.||..|                               
Zfish    26 AQGACGAGTLPEAESASSPMAT-----SLDQIGRSVSVVAGESEDDELTNLNWLHENLLQNFSLG 85

  Fly    50 ----YPYSASAY----GLGAPHQNKEI---------------VKPPYSYIALIAMAIQNAADKKV 91
                .|.::..:    |:|:||.|...               .|||:|:..||.|||:.:..|.:
Zfish    86 GPEAQPINSPLFDIEGGIGSPHSNTNSSASSVSTGSERDPYKSKPPFSFSLLIYMAIEQSPSKSL 150

  Fly    92 TLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD-DKKPGKGSYWTLDPD 149
            .:..||.:|::.|||:.....||:||:|||||||:||.||.|. .|..||||.|.:.|:
Zfish   151 PVKDIYGWILKHFPYFSSAPTGWKNSVRHNLSLNKCFRKVERSIGKTNGKGSLWCVHPE 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 39/82 (48%)
foxn2bNP_001017555.2 FH_FOX 128..209 CDD:469596 38/80 (48%)

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