DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxh1

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001017084.1 Gene:foxh1 / 549838 XenbaseID:XB-GENE-1194372 Length:515 Species:Xenopus tropicalis


Alignment Length:342 Identity:82/342 - (23%)
Similarity:131/342 - (38%) Gaps:108/342 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            ||||||:|:||:.|||:.:|::.|:.|.:.:...||:::.:..||::|||||||.|:||.||.:|
 Frog   110 KPPYSYLAMIALVIQNSPEKRLKLSQILKEVSTLFPFFKGDYMGWKDSIRHNLSSNDCFKKVLKD 174

  Fly   135 DKKP-GKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKP---- 194
            ..|| .||::||:|.....:                |.|:.:..|:.|.. .:..:.::.|    
 Frog   175 PGKPQAKGNFWTVDVSRIPL----------------DAMKLQNTALTRGG-SDYFVQDLAPYILH 222

  Fly   195 -LKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAG-GGVEH 257
             .|...|.::.|.|      |..               |||:.|     .||:..|... ||..:
 Frog   223 NYKYEHNVVVYAPH------HMP---------------SHASSL-----PLAEDPHQTNTGGKLN 261

  Fly   258 PGFTVDSLM-------------NVYNPRIHHSA------------YP------------------ 279
            ..|.:|||:             |:.:.||..:.            ||                  
 Frog   262 TSFMIDSLLNDLQDVDLPDVPRNIESQRISPAVAINNMWSSAPLLYPQSKPTRNGRGPGFSASHS 326

  Fly   280 -YHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTP 343
             |..:..:::|::..........:.....:|.||.......|....|              .|||
 Frog   327 TYSSSSSSISTISPVGFQETQERSEDLLGRQTQRLGFPTKRPREDDG--------------CSTP 377

  Fly   344 HGPAHGGWYTPETPPSE 360
            ......|.|:|..||.:
 Frog   378 SSDTDAGNYSPTEPPKK 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 39/89 (44%)
foxh1NP_001017084.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..103
FH_FOXH 110..188 CDD:410796 38/77 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 307..399 17/102 (17%)
SMAD-interaction domain (SID) 377..503 6/18 (33%)
Fast/FoxH1 motif 1 (FM1). /evidence=ECO:0000255 402..406
Fast/FoxH1 motif 2 (FM2). /evidence=ECO:0000255 412..418
SMAD-interaction motif (SIM) 467..488
Blue background indicates that the domain is not in the aligned region.

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