DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxn2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001017017.1 Gene:foxn2 / 549771 XenbaseID:XB-GENE-952918 Length:334 Species:Xenopus tropicalis


Alignment Length:266 Identity:72/266 - (27%)
Similarity:107/266 - (40%) Gaps:72/266 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 SAYGLGAPHQNKEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIR 119
            |..|...|.:.....|||||:..||.|||:::.:|.:.:..||.:|::||||:.....||:||:|
 Frog    93 SPSGCQTPEKLSASSKPPYSFSLLIYMAIEHSPNKCLPVKDIYSWILDRFPYFATAPTGWKNSVR 157

  Fly   120 HNLSLNECFVKVARD-DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQA 183
            ||||||:.|.||.|. .|..||||.|.:||:                :|...:     :|:|:|.
 Frog   158 HNLSLNKYFQKVERSHGKVNGKGSLWCVDPE----------------YKPSLI-----QALKKQP 201

  Fly   184 MMNEKLAEMKPLKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMN 248
             .:..||...|                        |.......|...||..:.:...::.:.:.:
 Frog   202 -FSSALALYTP------------------------PTSPTSVSSRSSVSSLSSVEEVYEFIPKNS 241

  Fly   249 HLAGGGVEHPGF----------TVDSLMN---VYNPRIHHSAYPYHLN----------EDNLATV 290
            .....|.|  ||          ..|.|.:   |..|.|:.|:...|.|          :|.|...
 Frog   242 RAGSDGSE--GFHSEDDTDIDYEEDMLGDSGYVSQPCINPSSNDLHGNKLRKEACQDIDDELKEA 304

  Fly   291 ASSQMH 296
            |.|.:|
 Frog   305 AGSLLH 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 41/90 (46%)
foxn2NP_001017017.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..108 3/14 (21%)
FH_FOXN2 107..188 CDD:410832 40/80 (50%)
Blue background indicates that the domain is not in the aligned region.

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