DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxi2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001016544.1 Gene:foxi2 / 549298 XenbaseID:XB-GENE-982122 Length:350 Species:Xenopus tropicalis


Alignment Length:307 Identity:109/307 - (35%)
Similarity:149/307 - (48%) Gaps:85/307 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RHYAQTAAGYGSASAVAAASSASAAAAAHYAY--------DQY----SRYPYSASAYG------- 58
            |..|..|.|||       .:..|:..|:.|.:        ..|    |..||..:.||       
 Frog    22 RPAAPPALGYG-------RNEYSSPTASPYPWLNGPAMNSSPYLNGGSGSPYFPAGYGGGQRQFI 79

  Fly    59 -------------LGAPHQNK--EIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYR 108
                         |..|:|..  ::|:|||||.:||||||||..:||:||:.||.|:.|.||:|:
 Frog    80 PPSSGFGVADFPWLSIPNQADLLKMVRPPYSYSSLIAMAIQNNPEKKLTLSQIYSYVAENFPFYK 144

  Fly   109 DNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKK---- 169
            .:|.|||||||||||||:||.||||||..||||:||||||:...|||||:|.|:|:|..:.    
 Frog   145 KSKAGWQNSIRHNLSLNDCFKKVARDDNDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSESVEAG 209

  Fly   170 ---DVMREKEE-AIKRQAMMNEKLAEMKPLKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKE 230
               |...:|:| |:|  ::.::.......|:..:.|..|:|...|             |.|:..:
 Frog   210 FDGDASEDKKELALK--SLGSDSPRGASALEQSSYGTPESKSRPA-------------GGLAALD 259

  Fly   231 VSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDSLMNVYNPRIHHSA 277
            .||      |..:.|.              .:::||||..|| |.||
 Frog   260 SSH------CFTNFAS--------------NMNALMNVGAPR-HFSA 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 62/89 (70%)
foxi2NP_001016544.1 FH_FOX 103..202 CDD:469596 65/98 (66%)

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