DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxd3

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001011383.1 Gene:foxd3 / 496851 XenbaseID:XB-GENE-487289 Length:369 Species:Xenopus tropicalis


Alignment Length:312 Identity:112/312 - (35%)
Similarity:157/312 - (50%) Gaps:71/312 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TAAGYGSASAVAAASSASA---------------------AAAAHYAYD-------QYSRYPYSA 54
            |.:|..|||.::..:..||                     .:.|.:|.:       :.:|.|..:
 Frog     2 TLSGSSSASDMSGQTVLSADDADIDVVGEGDEPLDKDSECGSPAGHAEEADELGGKEIARSPSGS 66

  Fly    55 S--AYGLGAPH-----QNK---EIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRD 109
            :  |.|.|...     |||   .:|||||||||||.|||..:..||:||:||.::|..||||||:
 Frog    67 ANEAEGKGESQQQEGMQNKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYRE 131

  Fly   110 NKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKK--DVM 172
            ....||||||||||||:||||:.|:...||||:||||||.|.:|||||||||||:|||::  |.:
 Frog   132 KFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRQQPDSL 196

  Fly   173 REKEEAIKRQAMMNEKLAEM--KPLKLMTNGILEAKHMAA--HAAHFKKEPLMDLG--------C 225
            || :.|:..|:.....||..  :|..|         |.||  |.|..:...:..:|        .
 Frog   197 RE-QTALMMQSFGAYSLAGPYGRPYGL---------HPAAYTHPAALQYPYIPPVGPMLPPAVPL 251

  Fly   226 LSGKEVSHAAMLNSCHDSL-AQMNHLAGGGV--------EHPGFTVDSLMNV 268
            |...|:|..|..:....|| .|::.|:....        ..|.|::::::.|
 Frog   252 LPSSELSRKAFSSQLSPSLQLQLSSLSSTAASIIKSEPSSRPSFSIENIIGV 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 56/85 (66%)
foxd3NP_001011383.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..89 17/86 (20%)
Forkhead 92..177 CDD:365978 55/84 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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