DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxj1.2

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001008143.1 Gene:foxj1.2 / 493505 XenbaseID:XB-GENE-919738 Length:371 Species:Xenopus tropicalis


Alignment Length:185 Identity:63/185 - (34%)
Similarity:85/185 - (45%) Gaps:53/185 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVAR 133
            :||||||..||.||::.:..:|:||:.||.:|.:.|.|||.....||||||||||||:||:||.|
 Frog   108 IKPPYSYATLICMAMEASQQRKLTLSAIYSWITQNFCYYRHADPSWQNSIRHNLSLNKCFMKVPR 172

  Fly   134 DDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLM 198
            ...:||||.:|.:||...:||.||...|||                                   
 Frog   173 GKDEPGKGGFWQMDPRYADMFVNGVLKRRR----------------------------------- 202

  Fly   199 TNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGG 253
                :.|.|:         :|..   |  .|.::|...|.....|...|.|::||
 Frog   203 ----MPASHL---------DPPR---C--NKAIAHHPYLPVSRPSSHHMQHISGG 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 46/85 (54%)
foxj1.2NP_001008143.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 45..74
COG5025 <61..>262 CDD:227358 63/185 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..99
Forkhead 108..194 CDD:365978 45/85 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 228..248 5/12 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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