DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and fkh

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster


Alignment Length:598 Identity:159/598 - (26%)
Similarity:224/598 - (37%) Gaps:202/598 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YAQTAAGYGSASAVAAASSASAAAA----AHYAYDQYSRYPYSASAYGLGAPHQNKEI------- 68
            ||...:..|:.....|.|:||.:||    .:.|....||...:.|...||....:|..       
  Fly   143 YASMGSPLGNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGSPNSLGRSRVDKPTTYRRSYT 207

  Fly    69 -VKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVA 132
             .|||||||:||.|||||...:.:||:.|||:||:.||:||.|:|.|||||||:||.|:||||:.
  Fly   208 HAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKIP 272

  Fly   133 RDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKR--QAMMNEKLAEMKPL 195
            |...||||||:|||.|||.|||:||.:|||::|||.     ||:|||::  ::..:..|....|.
  Fly   273 RTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKD-----EKKEAIRQLHKSPSHSSLEATSPG 332

  Fly   196 KLMTNGILEAKHMAAH--------------------------AAHFK-KEPLMDLG-----CLS- 227
            |   ....::.||..|                          |||.| .|.|..|.     ||| 
  Fly   333 K---KDHEDSHHMHHHHHSRLDHHQHHKEAGGASIAGVNVLSAAHSKDAEALAMLHANAELCLSQ 394

  Fly   228 ----------------GKEVSHAAMLNSCHDSLAQMNHLAGGGVE----------HPGFTVDSLM 266
                            .:|...|.|.|.||.||....|.:...::          || |:::.|:
  Fly   395 QPQHVPTHHHHQHHQLQQEELSAMMANRCHPSLITDYHSSMHPLKQEPSGYTPSSHP-FSINRLL 458

  Fly   267 -------------------NVYNP--------------------------RIHHSAYPYHLNEDN 286
                               |..:|                          .: |..||       
  Fly   459 PTESKADIKMYDMSQYAGYNALSPLTNSHAALGQDSYYQSLGYHAPAGTTSLXHHQYP------- 516

  Fly   287 LATVASSQM---HHVHHAAAAH--HAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGP 346
            || ..:.||   ....|....|  |.||.|:|..|        .|....|.|....|:.|.    
  Fly   517 LAXGRAEQMLRSQQQQHLQQQHQQHQQQQQQHQLH--------QQQQQMQQSAQQLTSASN---- 569

  Fly   347 AHGGWYTPETPPSEPVPHNGQQGTPTHPGHNNNNSSSVLNHNGVGNGGGGGGGGGGGSSSVLTSS 411
                  ||.|....    :|:.|:.:                  .:|.|.|.|.|.||:      
  Fly   570 ------TPATSAKA----SGKAGSAS------------------ASGSGSGSGSGSGSN------ 600

  Fly   412 PTSALGFRDMIFEQNQSCQLDTGSP-----------TGSLQSASPPASASVAAASAAAAAAVISS 465
                  :...:.:|:|..|....:.           ...||..|...::.::........|....
  Fly   601 ------YSQKLQQQHQQQQQQQAAAQQQHHQQQQQLLQELQEDSSNITSDLSEEQLQQHQAAQQQ 659

  Fly   466 HHHHHHHHAALSG 478
            .::::..:||.:|
  Fly   660 LYNNYQQYAAAAG 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 59/89 (66%)
fkhNP_001263038.1 Forkhead_N <120..209 CDD:369872 16/65 (25%)
FH_dFKH 210..307 CDD:410815 63/96 (66%)

Return to query results.
Submit another query.