DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and fd96Cb

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_524496.1 Gene:fd96Cb / 43011 FlyBaseID:FBgn0004898 Length:271 Species:Drosophila melanogaster


Alignment Length:158 Identity:72/158 - (45%)
Similarity:104/158 - (65%) Gaps:8/158 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            |||||||:|.||||.::..:.:.|:.||::||::||:||.|.|.||||:|||||.|:||:||.|:
  Fly    13 KPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNLSFNDCFIKVPRN 77

  Fly   135 DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFK----KKDVMREKEEAIKRQAM----MNEKLAE 191
            ..|.||||||||.|.:::||:|||.||||:||:    :||:...|..|.....|    ::::|.:
  Fly    78 VTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLEKDISNWKLAAAANTEMVTHYLDDQLTQ 142

  Fly   192 MKPLKLMTNGILEAKHMAAHAAHFKKEP 219
            |.......:|.:.|...||..:.:|..|
  Fly   143 MAFADPARHGHVLANASAAQMSPYKATP 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 52/88 (59%)
fd96CbNP_524496.1 FH_FOX 1..110 CDD:469596 58/96 (60%)

Return to query results.
Submit another query.