DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and fd96Ca

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_524495.1 Gene:fd96Ca / 43010 FlyBaseID:FBgn0004897 Length:372 Species:Drosophila melanogaster


Alignment Length:353 Identity:113/353 - (32%)
Similarity:158/353 - (44%) Gaps:83/353 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            |||||||:|.||||.::.:|.:.|:.||::|.:||||||.|.|.||||:|||||.|:||:||.|.
  Fly    13 KPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNLSFNDCFIKVPRR 77

  Fly   135 DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFK----KKDVMREKEEAIKRQAMMNE-------- 187
            ..:||||:||.|.|.:::||:|||.||||:|||    .||::.|:..|:   |.:|.        
  Fly    78 PDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKNDKDLLNEELTAL---ANLNRFFFTTRNG 139

  Fly   188 -KLAEMKPLKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSH---AAMLNSCHDSLAQMN 248
             ..|.|.||.:.....:....:....||...    .||  .|..:.|   |:|..:.|.:||.|.
  Fly   140 GSAAHMSPLDMNNAAAMRLDPLPRSTAHMPN----SLG--PGVPLPHVMPASMSGADHTNLADMG 198

  Fly   249 -----HLAGGGVEHP-------GFTVDSLMNVYNPRIHHSAYPYHLNED--------NLATVASS 293
                 .|....:|.|       .||::||:....|.        |.:||        ::..|..|
  Fly   199 LTNLPALTSSEIEGPLSLRPKRSFTIESLITPDKPE--------HPSEDEDDEDDRVDIDVVECS 255

  Fly   294 QMHHVHHAAAAHHAQQLQRHVAHVAHPLTP-----------------GGQGAGGQSSG--HSPTT 339
            .:.......||..........:....||.|                 |...||..:||  :||||
  Fly   256 GISRYPTTPAASEEYMSASRSSRTEDPLPPMHTINAGAHVPFLHYATGANVAGLPASGIPNSPTT 320

  Fly   340 -----------ISTPHGPAHGGWYTPET 356
                       ::.|....|..:|...|
  Fly   321 YELAISHPLFMMAAPIANMHNIYYNNVT 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 52/88 (59%)
fd96CaNP_524495.1 FH_FOX 1..110 CDD:469596 58/96 (60%)

Return to query results.
Submit another query.