DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxq1b

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_998072.2 Gene:foxq1b / 405843 ZFINID:ZDB-GENE-040426-2090 Length:304 Species:Danio rerio


Alignment Length:271 Identity:88/271 - (32%)
Similarity:131/271 - (48%) Gaps:65/271 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SASAYGLGAPHQNKEI------VKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNK 111
            ||::.|.|||..:.:.      .||||||||||||||:::...::||..|.:|:|::||::|.:.
Zfish    43 SANSPGPGAPVPDGKAKPYTRRPKPPYSYIALIAMAIRDSNTGRLTLAEINEYLMKKFPFFRGSY 107

  Fly   112 QGWQNSIRHNLSLNECFVKVARDDKKP-GKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDV-MRE 174
            .||:||:|||||||:||:||.||..:| ||.:||.|:|.|...|.:|.|.|||:|..||.: ..|
Zfish   108 TGWRNSVRHNLSLNDCFLKVLRDPSRPWGKDNYWMLNPHSEYTFADGVFRRRRKRISKKILGSAE 172

  Fly   175 KEEAI----KRQAMMNEKLAEM-----------KPL---------------KLMTNGILEAKHMA 209
            ..|.:    .|....:|.:::.           ||.               :||.:.   |.|..
Zfish   173 SPERVPADDSRLPARDESVSKFSSSFAIDSILSKPFMRREQSTDDTCFGTTRLMLSA---APHFL 234

  Fly   210 AHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCH--------------DSLAQMNH----LAGGGVE 256
            ..|..:..:....:    ..|||:...:..|:              .||..:.|    |...|. 
Zfish   235 PVAMGYPPQSRFQV----SSEVSNVFPIYRCNTADISNISRMADIQSSLPGLAHSHTTLQEAGF- 294

  Fly   257 HPGFTVDSLMN 267
            || |.:|||::
Zfish   295 HP-FRIDSLLS 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 49/90 (54%)
foxq1bNP_998072.2 FH_FOXQ1-like 66..144 CDD:410808 44/77 (57%)

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