DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and bin

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster


Alignment Length:513 Identity:129/513 - (25%)
Similarity:193/513 - (37%) Gaps:172/513 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YGSASAVAAAS---SASAAAAAHYAYDQYSRYPYSASAYGLGAPHQ--------------NKEIV 69
            |.|:|:..|.|   |.|:..:.::..::.|    .::..|.|...|              .:...
  Fly   250 YSSSSSSPAKSLNGSESSPPSQNHLENKVS----GSAVVGTGGSSQQDAPSTPDTTKKSGTRRPE 310

  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVAR- 133
            ||..|||.:|..||:.:...|:||:.||.|:.:.:.::|....||:||:||||||||||.|:.: 
  Fly   311 KPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFFRGPYVGWKNSVRHNLSLNECFKKLPKG 375

  Fly   134 -DDKKPGKGSYWTLDPDSYNMF-DNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLK 196
             ...|||||:|||:|.:|.::| |.||..||.|.::.|                           
  Fly   376 MGVGKPGKGNYWTIDENSAHLFEDEGSLRRRPRGYRSK--------------------------- 413

  Fly   197 LMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFT 261
                  ::.|..|.||..:......|.|..:|...:..|..:..:.:.........||   .|| 
  Fly   414 ------IKVKPYAGHANGYYASGYGDAGMDNGNYYASPAFASYDYSAAGATGVSPAGG---QGF- 468

  Fly   262 VDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGGQ 326
                           |.|::                                 ||.||    .|.
  Fly   469 ---------------ADPWN---------------------------------AHAAH----SGS 481

  Fly   327 GAGGQSSGHSP----TTIS--TPHGPAHGGWYTPETPPSEPVPHNGQQGTPTHPGHNNNNSSSVL 385
            .:.|...|..|    |.||  ...|..:|...||      |:.|:.....|     :.::|||.|
  Fly   482 SSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTP------PLAHSALGMAP-----SASSSSSPL 535

  Fly   386 NHNGVGNGGGGGGGGGGGSSSVLTS--SPTSALGFRDMIFEQNQSCQLDTGSPTGSLQSASPPAS 448
                             |:::.|.|  :||::|......:..:.. .||.|..:.|||..  |..
  Fly   536 -----------------GAAATLQSDYAPTASLVAAGYSYATSAG-SLDNGLRSISLQQL--PGL 580

  Fly   449 ASVAAASAAAAAAVISSHHHHHHHHAALSGNLGQLGQLSNLSHYRPHVGH---YQEYG 503
            :|:..|.|.|.|   .:|||||.|||            |:.||  .|.||   :|.:|
  Fly   581 SSIQHAQAQAQA---QAHHHHHQHHA------------SHPSH--SHQGHGSMHQNHG 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 41/88 (47%)
binNP_523950.2 Forkhead 311..399 CDD:278670 41/87 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445460
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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