DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and foxi3b

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_944600.1 Gene:foxi3b / 387258 ZFINID:ZDB-GENE-031126-4 Length:383 Species:Danio rerio


Alignment Length:284 Identity:94/284 - (33%)
Similarity:133/284 - (46%) Gaps:54/284 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HYAYDQYSRYPY-----------SASAYGLGAPHQNKEIVKPPYSYIALIAMAIQNAADKKVTLN 94
            ||...:    ||           ..|.:.:.:.....::|:|||||.|||||||..|.::::||:
Zfish    94 HYGMQR----PYLGPGPPGGPGGELSWFSMPSQEDLMKLVRPPYSYSALIAMAIHGAPERRLTLS 154

  Fly    95 GIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSF 159
            .||||:.:.||:|..:|.|||||||||||||:||.||.||:..||||:||||||:...|||||:|
Zfish   155 QIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNF 219

  Fly   160 LRRRRRFKKKDVMREKEEA--------------------IKRQAMMNEKLAEMKPLKLMTNGILE 204
            .|:|:|  |.|.:.||..:                    |..........|...|...::|.:.|
Zfish   220 RRKRKR--KSDSLPEKSSSGGNESGDSNGRGSPKSQSIDISTSPEKGPSPASTGPSPCLSNFLTE 282

  Fly   205 AKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDSLMNVY 269
            ...:||.:...:.:||           |....|:...|...:.:...|.....|..||....:..
Zfish   283 MSGVAAGSLDMEADPL-----------SRPFTLSLPVDGAQRASQTTGFSTFTPSTTVSDWASPL 336

  Fly   270 NPRIHHSAYPYHLNEDNLATVASS 293
            .|....|:.|.|      :|:|.|
Zfish   337 PPPPPMSSSPSH------STLAYS 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 54/85 (64%)
foxi3bNP_944600.1 FH 130..218 CDD:214627 56/87 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11829
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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