DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and Foxl3

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001182057.1 Gene:Foxl3 / 384244 MGIID:3646467 Length:216 Species:Mus musculus


Alignment Length:147 Identity:76/147 - (51%)
Similarity:95/147 - (64%) Gaps:28/147 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 SRYPYS-----ASAYGLGAPHQNKEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYY 107
            |:|||:     |..|..|:..:.|.:.:|.||||||||||||.:...:|||:|||.:||.:||||
Mouse     5 SQYPYNCFNDDADDYPAGSSDEEKRLTRPAYSYIALIAMAIQQSPAGRVTLSGIYDFIMRKFPYY 69

  Fly   108 RDNKQGWQNSIRHNLSLNECFVKVAR---DDKKPGKGSYWT--------LDPDSYNMFDNGSFLR 161
            |.|::.||||||||||||.|||||.|   :||  |||:|||        ||     :|:||:|.|
Mouse    70 RANQRAWQNSIRHNLSLNSCFVKVPRTEGNDK--GKGNYWTFAGGCESLLD-----LFENGNFRR 127

  Fly   162 RRRRFKKKDVMREKEEA 178
            ||||...|     :|||
Mouse   128 RRRRRGPK-----REEA 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 58/100 (58%)
Foxl3NP_001182057.1 FH_FOX 32..124 CDD:469596 57/98 (58%)

Return to query results.
Submit another query.