DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxl2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001414120.1 Gene:Foxl2 / 367152 RGDID:1310041 Length:374 Species:Rattus norvegicus


Alignment Length:434 Identity:128/434 - (29%)
Similarity:171/434 - (39%) Gaps:136/434 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 PYSASAYGLGAPHQNKEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQ 115
            |.|....|..||.:.....||||||:|||||||:.:|:|::||:||||||:.:||:|..||:|||
  Rat    31 PPSPGKGGGTAPEKPDPAQKPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQ 95

  Fly   116 NSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIK 180
            |||||||||||||:||.|:.....||:||||||...:||:.|:: |||||.|             
  Rat    96 NSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMK------------- 146

  Fly   181 RQAMMNEKLAEMKPLKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLA 245
                        :|.:             ...|||  :|...|....|                 
  Rat   147 ------------RPFR-------------PPPAHF--QPGKGLFGSGG----------------- 167

  Fly   246 QMNHLAGGGVEHPGFTVDSLMNVYNPRIHHSAY--------------PYHLNEDNLATVASSQMH 296
                 ..||...||...|....:..|:...|.:              ||          ||.||.
  Rat   168 -----GAGGCGVPGAGADGYGYLAPPKYLQSGFLNNSWPLPQPPSPMPY----------ASCQMA 217

  Fly   297 HVHHAAAAHHAQQLQRHVAHVAHPLTPGG----QGAGGQSSGHSP----TTISTPHGPAH----- 348
            ....||||         .|..|.|.:||.    :|..|.::.:.|    .:::.|.|..:     
  Rat   218 AAAAAAAA---------AAAAAGPGSPGAAAVVKGLAGPAASYGPYSRVQSMALPPGVVNSYNGL 273

  Fly   349 GGWYTPETPPSEPVPH----------NGQQGTPTHPGHNNNNSSSVLNHNGVGNGGGGGGGGGGG 403
            ||  .|..||..|.||          :.....|..|.|          |.......|........
  Rat   274 GG--PPAAPPPPPPPHPHPHPHAHHLHAAAAPPPAPPH----------HGAAAPPPGQLSPASPA 326

  Fly   404 SSSVLTSSPTSALGFRDMIFEQNQSCQL-----DTGSPTGSLQS 442
            :::....:||||.|.:.....|.:...:     |..|.||:|.|
  Rat   327 TAAPPAPAPTSAPGLQFACARQPELAMMHCSYWDHDSKTGALHS 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 58/89 (65%)
Foxl2NP_001414120.1 None

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