DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxi1

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_859424.1 Gene:foxi1 / 353313 ZFINID:ZDB-GENE-030505-1 Length:377 Species:Danio rerio


Alignment Length:417 Identity:116/417 - (27%)
Similarity:160/417 - (38%) Gaps:164/417 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 HYAYDQYSRYPYSASAYGLG---APHQNK------------------------------------ 66
            |:.:..:.|.|...|:||||   :|..|.                                    
Zfish    50 HHHHHHHQRPPAHPSSYGLGEYSSPSTNPYLWMNSPGITSTPYLSSPNGGSYIQSGFGSNQRQFL 114

  Fly    67 -----------------------EIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYR 108
                                   ::|:|||||.||||||||||.|||:||:.||||:.:.||:|:
Zfish   115 PPPTGFGSADLGWLSISSQQELFKMVRPPYSYSALIAMAIQNAQDKKLTLSQIYQYVADNFPFYK 179

  Fly   109 DNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMR 173
            .:|.|||||||||||||:||.|||||:..||||:||||||:...|||||:|.|:|:|....:.|.
Zfish   180 KSKAGWQNSIRHNLSLNDCFKKVARDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRADGNAMS 244

  Fly   174 EK-EEAIKRQAMMNEKLAEMKPLKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAML 237
            .| |:|:        |||:       |:.::.|...:...:....:|        ....|.:|..
Zfish   245 VKSEDAL--------KLAD-------TSSLMSASQPSLQNSPTSSDP--------KSSPSPSAEH 286

  Fly   238 NSCHDS-LAQMNHLAGGGVEHPGFTVDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHA 301
            :.|..: :..||.:..|             |....|...||   ||.:            ...|.
Zfish   287 SPCFSNFIGNMNSIMSG-------------NAVRSRDGSSA---HLGD------------FTQHG 323

  Fly   302 AAAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTPETPPSEPVPHNG 366
            .:.|..                                                :|||||...|.
Zfish   324 MSGHEI------------------------------------------------SPPSEPGHLNT 340

  Fly   367 QQGTPTHPGHNNNN-SSSVLNHNGVGN 392
            .:.......|||:. .:|:.||..|.|
Zfish   341 NRLNYYSASHNNSGLINSISNHFSVNN 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 64/89 (72%)
foxi1NP_859424.1 FH_FOX 138..237 CDD:469596 67/98 (68%)

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