DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and slp2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster


Alignment Length:314 Identity:114/314 - (36%)
Similarity:147/314 - (46%) Gaps:69/314 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 GAPHQNKE-IVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLS 123
            |.|.::|: ..||||||.|||.|||:.:::|::||||||:|||...|||||||||||||||||||
  Fly   169 GKPVKDKKGNEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLS 233

  Fly   124 LNECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEK 188
            ||:|||||.|....||||:||.|||.:.::|..||..:.|||  .....|.:..|.||..     
  Fly   234 LNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRR--TTAASRSRLAAFKRSL----- 291

  Fly   189 LAEMKPLKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQ-MNHLA- 251
            :..|.|            .:||:...             |:.:::.....|...|:.| .|..| 
  Fly   292 IGPMFP------------GLAAYPQF-------------GQFLTYPPTAPSLLASMYQRYNPFAP 331

  Fly   252 GGGVEHPGFT--VDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMH---------HVHHAAAAH 305
            .||..|||..  :..|.....|:......|    ...:|...||:::         |.|.||||.
  Fly   332 KGGPGHPGLPPGLPGLPGPPGPQGPPGPPP----PPFVAPPTSSELYQRLQYQQLLHQHAAAAAL 392

  Fly   306 HAQQLQRHVA------------HVAH------PLTPGGQGAGGQSSG-HSPTTI 340
            .|.|.|..||            |..|      ||:|||...|..... |.|.|:
  Fly   393 AAHQRQLSVAAASAASQPPPTHHHPHLAVGQAPLSPGGDSPGPSPQPLHKPVTV 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 60/89 (67%)
slp2NP_476834.1 FH_FOXG 180..258 CDD:410795 56/77 (73%)

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