DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxk2a

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001184186.1 Gene:foxk2a / 324141 ZFINID:ZDB-GENE-030131-2861 Length:544 Species:Danio rerio


Alignment Length:383 Identity:111/383 - (28%)
Similarity:156/383 - (40%) Gaps:82/383 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GSASAV-AAASSASAAAAAHY---------AYDQYSRYPYSASAYGLGAPHQNKEIVKPPYSYIA 77
            |:.||. :..||...|..:.|         ..::.|:......|.|..:|   |:..||||||..
Zfish   150 GTISAANSCPSSPRGAGLSSYRMGRGLTAELINENSQSEIDKEASGGDSP---KDDSKPPYSYAQ 211

  Fly    78 LIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGS 142
            ||..||..|.||::||||||.:|.:.:||||...:|||||||||||||..|:||||..::|||||
Zfish   212 LIVQAITMAPDKQLTLNGIYTHITKNYPYYRTADKGWQNSIRHNLSLNRYFIKVARSQEEPGKGS 276

  Fly   143 YWTLDPDSYNMFDNGSFLRRRRR----FKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMTNGIL 203
            :|.:||.|.....:.:|.:||.|    |:..            ...::.:.|...|..   .|:|
Zfish   277 FWRIDPSSEGKLMDQAFRKRRPRGVPCFRTP------------LGPLSSRSAPASPTH---TGVL 326

  Fly   204 EAKHMAAHAAHFKKE----PL-MDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVD 263
            .|...........:|    || .:....:..:...|.:..||...            ..||..| 
Zfish   327 SAHSSGVQTPDSSREGSPLPLEPEPSAAAAPQPKLAVIQESCFTQ------------NTPGSPV- 378

  Fly   264 SLMNVYNPRIHHSAYPYHLNEDNLATVASS--------QMHHVHH--AAAAHHAQQLQ---RHVA 315
             |:.|..| :..|..|...   ::||.|||        .:|.:|.  ||....|:|..   :.|.
Zfish   379 -LIAVQQP-LQQSLKPVSF---SVATPASSAAPQPVMQTLHLLHQIPAACVFRAEQQNGDAQEVK 438

  Fly   316 HVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTPETPPSEPVPHNGQQGTPTH 373
            ....|:.......|..|....|..:: |.|        ....|.:|:..||     ||
Zfish   439 VTVEPVPAVAAAPGASSRVLQPLAVA-PRG--------QHQLPVKPITQNG-----TH 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 51/85 (60%)
foxk2aNP_001184186.1 FHA 16..105 CDD:238017
Forkhead 204..290 CDD:278670 51/85 (60%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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