DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxn3

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_006240491.1 Gene:Foxn3 / 314374 RGDID:1305711 Length:479 Species:Rattus norvegicus


Alignment Length:127 Identity:51/127 - (40%)
Similarity:72/127 - (56%) Gaps:16/127 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SASAVAAASSASAAAAAHYAYDQYSRYPYSASAYGLGAPHQNKEIVKPPYSYIALIAMAIQNAAD 88
            |.|.|......:..:.||      |..||.|        .||.. .|||||:..||.|||:::..
  Rat    83 SVSPVQDLDDDTPPSPAH------SDMPYDA--------RQNPN-CKPPYSFSCLIFMAIEDSPT 132

  Fly    89 KKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD-DKKPGKGSYWTLDPD 149
            |::.:..||.:|:|.|||:.:...||:||:|||||||:||.||.:: .:..||||.|.:||:
  Rat   133 KRLPVKDIYNWILEHFPYFANAPTGWKNSVRHNLSLNKCFKKVDKERSQSIGKGSLWCIDPE 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 40/82 (49%)
Foxn3XP_006240491.1 FH_FOXN3 114..203 CDD:410833 40/81 (49%)

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