DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxd2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001386132.1 Gene:Foxd2 / 313504 RGDID:1304642 Length:494 Species:Rattus norvegicus


Alignment Length:502 Identity:143/502 - (28%)
Similarity:185/502 - (36%) Gaps:125/502 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GSASAVAAASSASAAAAAHYAYDQYSRYPYSASAYGLGAPHQNKEIVKPPYSYIALIAMAIQNAA 87
            |...|.|||.|......|  |.......|........|.......:|||||||||||.|||..:.
  Rat    86 GPRGAAAAAGSPGPGVQA--ARGATGPGPGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQSP 148

  Fly    88 DKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDSYN 152
            .|::||:.|.::|..||||||:....||||||||||||:||||:.|:...||||:||||||:|.:
  Rat   149 KKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESAD 213

  Fly   153 MFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMTNGILEAKHMAAHAAHFKK 217
            |||||||||||:|||::.:......            ....|..|:..|...|....|..:.|..
  Rat   214 MFDNGSFLRRRKRFKRQPLPPPHPH------------PHPHPELLLRGGAAAAGDPGAFLSGFAA 266

  Fly   218 EPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDSLMNVYNPRIHHSAYPYHL 282
            ......|.                 .||    |...|...||           |..|...:|:..
  Rat   267 YGAYGYGY-----------------GLA----LPAYGAPPPG-----------PAPHPHPHPHAF 299

  Fly   283 NEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPA 347
                              |.||....||.          .|.|:.|            :.|.||.
  Rat   300 ------------------AFAATAPCQLS----------VPPGRAA------------APPPGPP 324

  Fly   348 HGGWYTPETPPSEPVPHNGQQGTPT----------------HP--------GHNNNNSSSVLNHN 388
            ....:...|....|.|..|...:|.                :|        |.....||::|...
  Rat   325 TASVFASATSAPAPAPAPGSGPSPAGLPAFLGAELGCAKAFYPASLSPPAAGTAATLSSALLRQG 389

  Fly   389 GVGNGGGGGGGGGGGSSSVLTSSPTSALGFRDMIFEQNQSCQLDTGSPTGS-----LQSASPPAS 448
            ...:.|||.||||.|:.    ..|:.::   |.|...........||..||     ..:|.|...
  Rat   390 LKTDAGGGAGGGGAGAG----QRPSFSI---DHIMGHGGGGAAPPGSGDGSPGSPFAAAAGPGGQ 447

  Fly   449 ASVAAASAAAAAAVISSH-HHHHHHHAALSGNLGQLGQLSNLS--HY 492
            |.|.|...|.|...::.| ...|...:.||.......:::.||  |:
  Rat   448 AQVLAMLTAPALTPVAGHIRLSHPGDSLLSSGPSFASKVAGLSGCHF 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 58/89 (65%)
Foxd2NP_001386132.1 FH_FOXD1_D2-like 131..229 CDD:410820 65/97 (67%)

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