DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxs1

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001012091.1 Gene:Foxs1 / 311547 RGDID:1310679 Length:327 Species:Rattus norvegicus


Alignment Length:332 Identity:125/332 - (37%)
Similarity:161/332 - (48%) Gaps:70/332 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 APHQNKEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLN 125
            ||  :.|..|||||||||||||||::..::.||:|||:|||.||.:||.|:.|||||||||||||
  Rat    11 AP--STEPSKPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLN 73

  Fly   126 ECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLA 190
            ||||||.|||:|||||||||||||.::||.:||||||||||.|:...:..:..:|         |
  Rat    74 ECFVKVPRDDRKPGKGSYWTLDPDCHDMFQHGSFLRRRRRFTKRTGAQGTKGPVK---------A 129

  Fly   191 EMKPLKL---------MTNGIL-----EAKH-------MAAHAAHF-----KKEPLMDLG----- 224
            :.:||:.         .|.|.|     |..:       |.:..|:.     ...|.:..|     
  Rat   130 DHRPLRATSPDQGAPNTTTGRLCPFPPEVPNPKGFGGLMGSLPANMCPTTSDTRPQLPTGPKDMC 194

  Fly   225 -CLSG--KEVSHAAMLNSC-----HDSLAQMNHLAGGGVEHPGFTVDSLMNVYNPRIH-----HS 276
             ..||  :|:|.|...:.|     ..:.::...|  |....|....:|:.:.|..|:.     ..
  Rat   195 SAKSGGPRELSEATSPSPCPAFGFSSAFSEAESL--GKAPTPSVAPESIGSSYQCRMQTLNFCMG 257

  Fly   277 AYP--YHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGG---QGAGGQSSGHS 336
            |.|  .||....:||..||.....|.|.....|...:        |..|||   ||..|...|..
  Rat   258 ADPGLEHLLTSAVATPGSSTPSASHRAPLPLPADSKE--------PWVPGGFPVQGGSGYPLGLP 314

  Fly   337 PTTISTP 343
            |....||
  Rat   315 PCLYRTP 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 66/89 (74%)
Foxs1NP_001012091.1 FH_FOXS1 17..116 CDD:410811 75/98 (77%)

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