DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxd3

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_571365.2 Gene:foxd3 / 30548 ZFINID:ZDB-GENE-980526-143 Length:371 Species:Danio rerio


Alignment Length:233 Identity:94/233 - (40%)
Similarity:131/233 - (56%) Gaps:38/233 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PHQNK---EIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLS 123
            |.|||   .:|||||||||||.|||..:..||:||:||.::|..||||||:....||||||||||
Zfish    85 PMQNKPKSSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLS 149

  Fly   124 LNECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKK--KDVMREKEEAIKRQAMMN 186
            ||:||||:.|:...||||:||||||.|.:|||||||||||:|||:  .|::|:      :.|:| 
Zfish   150 LNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQPDILRD------QTALM- 207

  Fly   187 EKLAEMKPLKLMTNGILEAKHMAAHAAHFKKE------------PLMD--LGCLSGKEVSHAAML 237
                 |:.......|....:|...|.|.:...            |::.  :..|...|::..|..
Zfish   208 -----MQSFGAYGIGNPYGRHYGIHPAAYTHPAALQYPYIPPVGPMLPPAVPLLPSAELNRKAFS 267

  Fly   238 NSCHDSL-AQMNHLAGGGV------EHPGFTVDSLMNV 268
            :....|| .|:|.|:...:      ..|.|::::::.|
Zfish   268 SQLSPSLQLQLNSLSTASIIKSEPSSRPSFSIENIIGV 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 60/89 (67%)
foxd3NP_571365.2 FH_FOXD3 95..191 CDD:410821 66/95 (69%)

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