DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxd2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_571346.2 Gene:foxd2 / 30525 ZFINID:ZDB-GENE-980605-6 Length:369 Species:Danio rerio


Alignment Length:465 Identity:134/465 - (28%)
Similarity:173/465 - (37%) Gaps:159/465 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 HTLFSDQNSFTRHYAQTAAGYGSASAVAAASSASAAAAAHYAYDQYSRYPYSASAYGLGAPHQNK 66
            |..|...|....:.:|. ||.|:.|  ...||....|      |:..:...|.:....|......
Zfish    36 HLSFHLDNDSDDNLSQN-AGEGAIS--PGQSSLDCPA------DRVGQRDDSRTGALTGDKPGKN 91

  Fly    67 EIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKV 131
            .:|||||||||||.|||..:..|::||:.|.::|..||||||:....||||||||||||:||||:
Zfish    92 ALVKPPYSYIALITMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKI 156

  Fly   132 ARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLK 196
            .|:...||||:||||||:|.:|||||||||||:|||:.                           
Zfish   157 PREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRH--------------------------- 194

  Fly   197 LMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFT 261
             .||.||..                                             |||.:  |||.
Zfish   195 -QTNEILRE---------------------------------------------AGGFL--PGFG 211

  Fly   262 VDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHH---AQQLQRHVAHVAHPLTP 323
                   |.|    ..|.|.|...|.         |.||....||   |...|.  .|.|.|   
Zfish   212 -------YGP----YGYNYGLQLQNF---------HAHHPYHPHHPGSAFPFQN--THCALP--- 251

  Fly   324 GGQGAGGQSSGHSPTTI-STPHG-PAHGGW-----YTPETPPSEP--VPHNGQQGTPTHPGHNNN 379
                        :|::| ||||. |:..|.     :.|:..|:.|  .|.......|:.|..:.:
Zfish   252 ------------TPSSIFSTPHSLPSFLGTELRKPFYPQLSPTLPGLAPLKTDTNGPSRPSFSID 304

  Fly   380 NSSSVLNHNGVGNGGGGGGGGGGGSSSVLTSSP----------TSALGFRDMIFEQNQSCQLDTG 434
            |..                |.....:|..|:.|          |..|..........|...|..|
Zfish   305 NII----------------GAASSPASPYTTQPAGQAQILAMLTPTLASATNHLSITQETMLQPG 353

  Fly   435 SPTGSLQSAS 444
            :.|.|.:::|
Zfish   354 TQTFSSKTSS 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 58/89 (65%)
foxd2NP_571346.2 FH_FOXD1_D2-like 95..193 CDD:410820 65/97 (67%)

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