DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and foxg1a

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_571142.1 Gene:foxg1a / 30274 ZFINID:ZDB-GENE-990415-267 Length:420 Species:Danio rerio


Alignment Length:346 Identity:110/346 - (31%)
Similarity:155/346 - (44%) Gaps:63/346 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 QNKEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECF 128
            :|.:..|||:||.|||.|||:.:.:|::||||||::||:.|||||:||||||||||||||||:||
Zfish   107 KNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCF 171

  Fly   129 VKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMK 193
            |||.|....||||:||.|||.|.::|..|:..:.||                |......|||..:
Zfish   172 VKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRR----------------RSTTSRAKLAFKR 220

  Fly   194 PLKLMTNGILEAKHMAAHAAHFKKEPLMDL------GCLSGKEVSHAAMLNSCHDSLAQMNHLAG 252
            ..:|.:.|:.....  |.:.::...|.:.|      ..||....|.|...:....|.....:..|
Zfish   221 GARLTSTGLTFMDR--AGSLYWPMSPFLSLHHPRASSALSYNGASSAYPSHPMSYSTMLTQNSLG 283

  Fly   253 GGVEHP---GFTVDSLMNVYNPRIHHSAYPYHLNEDNLA-------TVASSQMHHVHHAAAAHHA 307
            .....|   |.:||.|:|...|...|     ||....||       :|..|..:.::..:....|
Zfish   284 NNHSFPASNGLSVDRLVNGEIPYATH-----HLTAAALAASVPCGLSVPCSGTYSLNPCSVNLLA 343

  Fly   308 QQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTPETPPSEPVP--------- 363
            .|......||.||          ..:..|.|::|:....:.    :|:|..|.|..         
Zfish   344 GQTSYFFPHVPHP----------SMTSQSSTSMSSRAASSS----SPQTASSLPCDSLRPSLSSF 394

  Fly   364 HNG-QQGTPTHPGHNNNNSSS 383
            .:| ..|...:..|.|..|:|
Zfish   395 SSGLSSGLSDYFTHQNQGSTS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 59/89 (66%)
foxg1aNP_571142.1 FH_FOXG 113..191 CDD:410795 54/77 (70%)
COG5025 <116..>292 CDD:227358 74/193 (38%)

Return to query results.
Submit another query.