DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and Foxl2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_036150.1 Gene:Foxl2 / 26927 MGIID:1349428 Length:375 Species:Mus musculus


Alignment Length:460 Identity:132/460 - (28%)
Similarity:178/460 - (38%) Gaps:140/460 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SASAVAAASSASAAAAAHYAYDQYSRYPYSASAYGLGAPHQNKEIVKPPYSYIALIAMAIQNAAD 88
            :|..:.|..|..|...|..:       |.|....|...|.:.....||||||:|||||||:.:|:
Mouse    11 TAGTLLAPESGRAVKEAEAS-------PPSPGKGGGTTPEKPDPAQKPPYSYVALIAMAIRESAE 68

  Fly    89 KKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDSYNM 153
            |::||:||||||:.:||:|..||:||||||||||||||||:||.|:.....||:||||||...:|
Mouse    69 KRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDM 133

  Fly   154 FDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMTNGILEAKHMAAHAAHFKKE 218
            |:.|:: |||||.|                         :|.:             ...|||  :
Mouse   134 FEKGNY-RRRRRMK-------------------------RPFR-------------PPPAHF--Q 157

  Fly   219 PLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDSLMNVYNPRIHHSAY----- 278
            |...|....|                      |.||...||...|....:..|:...|.:     
Mouse   158 PGKGLFGSGG----------------------AAGGCGVPGAGADGYGYLAPPKYLQSGFLNNSW 200

  Fly   279 ---------PYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGG----QGAGG 330
                     ||          ||.||.....||||         .|..|.|.:||.    :|..|
Mouse   201 PLPQPPSPMPY----------ASCQMAAAAAAAAA---------AAAAAGPGSPGAAAVVKGLAG 246

  Fly   331 QSSGHSP----TTISTPHGPAH------GGWYTPETPPSEPVPH--------NGQQGTPTHPGHN 377
            .::.:.|    .:::.|.|..:      |....|..||..|.||        :.....|..|.| 
Mouse   247 PAASYGPYSRVQSMALPPGVVNSYNGLGGPPAAPPPPPPPPHPHPHPHAHHLHAAAAPPPAPPH- 310

  Fly   378 NNNSSSVLNHNGVGNGGGGGGGGGGGSSSVLTSSPTSALGFRDMIFEQNQSCQL-----DTGSPT 437
                     |.......|........:::....:||||.|.:.....|.:...:     |..|.|
Mouse   311 ---------HGAAAPPPGQLSPASPATAAPPAPAPTSAPGLQFACARQPELAMMHCSYWDHDSKT 366

  Fly   438 GSLQS 442
            |:|.|
Mouse   367 GALHS 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 58/89 (65%)
Foxl2NP_036150.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 9/45 (20%)
FH_FOXL2 50..138 CDD:410802 57/87 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..341 16/78 (21%)

Return to query results.
Submit another query.