DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and sep1

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_596301.1 Gene:sep1 / 2540866 PomBaseID:SPBC4C3.12 Length:663 Species:Schizosaccharomyces pombe


Alignment Length:462 Identity:99/462 - (21%)
Similarity:160/462 - (34%) Gaps:132/462 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GSASAVAAASSASAAAAAHYAYDQYSRYPYSASAYGLGAP---------HQNKEI---------- 68
            |..:.:|:....|:.|...| ...|:|..||.....:..|         ::|..:          
pombe    55 GKENNIASFQKPSSKATRPY-IPSYTRLTYSVPPLPIPPPSEQSLDTIIYRNPSVSSSQSQEPEE 118

  Fly    69 --------VKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLN 125
                    .||||||..||.|:|..:.|:::||:.||.:|...|.:|..:..|||||||||||||
pombe   119 FFLPLDDGKKPPYSYAMLIGMSIIRSPDRRLTLSAIYDWISNTFSFYNKSNNGWQNSIRHNLSLN 183

  Fly   126 ECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLA 190
            :.|:|:.|....||||.:|::.|.                        .:|:.:|          
pombe   184 KAFMKIERPRNLPGKGHFWSIRPG------------------------HEEQFLK---------- 214

  Fly   191 EMKPLKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGV 255
                |||...|:             ...|...:     ::|:.:....|...|            
pombe   215 ----LKLRKPGV-------------NSRPAPPV-----QDVTSSTKYGSSTGS------------ 245

  Fly   256 EHPGF-TVDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAH 319
              .|| |.::..:::|.|..:....|..:..|:.|:::....:.|..    |:||        .:
pombe   246 --SGFNTFNTSPHIFNQRHQYLQNYYTASLTNIPTISNVNATNFHPL----HSQQ--------PY 296

  Fly   320 PLTPGGQGAGGQSSGHSPTTIS---TPHGPAHGGWYTPETPPSEPVPHNGQQGTPTHPGHN-NNN 380
            ..|||........:..|...:|   :...|......:|..|.|.|       .:...|..: .|.
pombe   297 VDTPGIDAPSDLEAKFSDLGVSSVVSVTSPLQSCTNSPSPPLSSP-------ASSASPSESLRNE 354

  Fly   381 SSSVLNHNGVGNGGGGGGGGGGGSSSVLTSSPT-----SALGFRDMIFEQNQSCQLDTGSPTGSL 440
            |..:.:...:|.........|...|.:.....|     |.|||.|.:....:.     |...|:.
pombe   355 SLGIKSAKSLGLNKDDAPVEGPPVSHLEKDVETPSVHDSVLGFNDTVTNLGKK-----GLKDGTT 414

  Fly   441 QSASPPA 447
            .:...||
pombe   415 NTLQIPA 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 40/85 (47%)
sep1NP_596301.1 COG5025 20..663 CDD:227358 99/462 (21%)
Forkhead 128..214 CDD:278670 41/109 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 104 1.000 Domainoid score I1720
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 1 1.000 - - otm47190
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11829
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.910

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