Protein Alignment croc and Foxa1

DIOPT Version :9

• Sequence 1: NP_524202.1
• Gene: croc / 40374
• FlyBaseID: FBgn0014143
• Length: 508
• Species: Drosophila melanogaster
• Sequence 2: XP_038967720.1
• Gene: Foxa1 / 25098
• RGDID: 2807
• Length: 475
• Species: Rattus norvegicus
• Alignment Length: 544
• Identity: 161/544 - (29%)
• Similarity: 194/544 - (35%)
• Gaps: 214/544 - (39%)

  Fly     1 MHTLFSDQN----SFTRHYAQTAAGYG-SASAVAAASSASAAA---------------------- 38
            |:|:.:..|    ||...||....|.| |..|||.....||.|
  Rat    50 MNTMTTSGNMTPASFNMSYANPGLGAGLSPGAVAGMPGGSAGAMNSMTAAGVTAMGAALSPGGMG 114

  Fly    39 --AAHYAYDQYSRYPYSAS--------AY---GLGA----------------PHQNKEIVKPPYS 74
              .|..|.......||:|:        ||   .||.                ||     .|||||
  Rat   115 SMGAQPAASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPH-----AKPPYS 174

  Fly    75 YIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPG 139
            ||:||.||||.|..|.:||:.|||:||:.|||||.|:|.|||||||:||.|:|||||||...|||
  Rat   175 YISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPG 239

  Fly   140 KGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMTNGILE 204
            |||||||.|||.|||:||.:|||::|||
  Rat   240 KGSYWTLHPDSGNMFENGCYLRRQKRFK------------------------------------- 267

  Fly   205 AKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDSLMNVY 269
                      .:|:|    |...|.                     .|||.:.............
  Rat   268 ----------CEKQP----GAGGGS---------------------GGGGSKGVPENRKDPSGPV 297

  Fly   270 NPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVA--HVAHPLT---PGGQGAG 329
            ||.                  |.|.:|...|..|:    ||:...|  ..|.|.|   .|....|
  Rat   298 NPS------------------AESPIHRGVHGKAS----QLEGAPAPGPAASPQTLDHSGATATG 340

  Fly   330 GQSSGHSPTTISTP---HGPAHGGWYTPETPPSEP----VPHNGQ---QGTP----THP-GHNNN 379
            |.|...||.:.|.|   .||.    .....|||.|    .||..|   :|.|    .|| ..||.
  Rat   341 GASELKSPASSSAPPISSGPG----ALASVPPSHPAHGLAPHESQLHLKGDPHYSFNHPFSINNL 401

  Fly   380 NSSSVLNHNGVGNGGGGGGGGGGGSSSVLTSSPTSALGFRDMIFEQNQSCQLDTGSPTGSLQSAS 444
            .|||...|.                           |.|:    ...|:.|.   ||.|:...||
  Rat   402 MSSSEQQHK---------------------------LDFK----AYEQALQY---SPYGATLPAS 432

  Fly   445 -PPASASVAAASAAAAAAVISSHH 467
             |..|||||..|....:|:..:::
  Rat   433 LPLGSASVATRSPIEPSALEPAYY 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
croc	NP_524202.1	Forkhead	70..156	CDD:278670	62/85 (73%)
Foxa1	XP_038967720.1	Forkhead_N	17..169	CDD:369872	27/123 (22%)
		FH_FOXA1	157..268	CDD:410812	72/162 (44%)
		HNF_C	394..457	CDD:401339	25/97 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910