DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxi2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001406478.1 Gene:Foxi2 / 246073 RGDID:621739 Length:311 Species:Rattus norvegicus


Alignment Length:292 Identity:103/292 - (35%)
Similarity:135/292 - (46%) Gaps:50/292 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NSFTRHYAQTAAGYGSASAVAAA---------SSASAAAAAHYAYDQYSRYPYSASAYGLGAPHQ 64
            ||.....|....|.|.|...|||         |.:...|.|..|:            ..|....:
  Rat    41 NSTALSPAPYTPGPGPAPTYAAAALAVSGSLLSPSGGLAGADLAW------------LSLSGQQE 93

  Fly    65 NKEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFV 129
            ...:|:|||||.||||||||:|..:::||:.||||:...||:|:.:|.|||||||||||||:||.
  Rat    94 LLRLVRPPYSYSALIAMAIQSAPLRRLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFK 158

  Fly   130 KVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKP 194
            ||.||:..||||:||||||:...|||||:|.|:|||      ..|..||....|...|: |.::|
  Rat   159 KVPRDENDPGKGNYWTLDPNCEKMFDNGNFRRKRRR------RGETSEAAVPGASRPER-AALEP 216

  Fly   195 LKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAM---LNSCHDSLAQMNHLAGGGVE 256
            ..|::..:..:....|..|         ..|||....:..|:   .::..|.|.|...|.....|
  Rat   217 SGLVSQDLQTSPSPTAPEA---------AACLSSFSTALGALAGGFSTLPDGLPQDFSLRRPPTE 272

  Fly   257 ----------HPGFTVDSLMNVYNPRIHHSAY 278
                      .|||...........|:.|..|
  Rat   273 SSRRPQIPNTSPGFGPGHQTGATGFRVGHLIY 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 59/89 (66%)
Foxi2NP_001406478.1 FH_FOX 96..188 CDD:469596 59/91 (65%)

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