DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxi3

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001094934.1 Gene:Foxi3 / 232077 MGIID:3511278 Length:399 Species:Mus musculus


Alignment Length:151 Identity:75/151 - (49%)
Similarity:100/151 - (66%) Gaps:12/151 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 YAQTAAGYGSASAVAAASSASAAAAAHYAYDQYSRYPYSASAYGLGAPHQNKEIVKPPYSYIALI 79
            :|....|:...||.|.||.|.:||            |.......:.:.....::|:|||||.|||
Mouse    86 FAGAQRGFAQPSASAPASPAGSAA------------PGELGWLSMASREDLMKMVRPPYSYSALI 138

  Fly    80 AMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYW 144
            |||||:|.::|:||:.|||::.:.||:|:.:|.|||||||||||||:||.||.||:..||||:||
Mouse   139 AMAIQSAPERKLTLSHIYQFVADNFPFYQRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYW 203

  Fly   145 TLDPDSYNMFDNGSFLRRRRR 165
            ||||:...|||||:|.|:|||
Mouse   204 TLDPNCEKMFDNGNFRRKRRR 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 55/85 (65%)
Foxi3NP_001094934.1 Forkhead 129..215 CDD:278670 55/85 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11829
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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