DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxe1

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_620264.1 Gene:Foxe1 / 192274 RGDID:621723 Length:370 Species:Rattus norvegicus


Alignment Length:426 Identity:133/426 - (31%)
Similarity:183/426 - (42%) Gaps:120/426 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 AVAAASSASAAAAAHYAYDQYSRYPYSASAYGLGAPHQNKEIV--KPPYSYIALIAMAIQNAADK 89
            |:||.......|||.      :..|...:..|.|...:.:.:.  ||||||||||||||.:|.::
  Rat    15 ALAAVKEERGEAAAG------AGVPAEVAGRGAGGRRRKRPLQRGKPPYSYIALIAMAIAHAPER 73

  Fly    90 KVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDSYNMF 154
            ::||.|||::|.||||:||||.:.|||||||||:||:||:|:.|:..:||||:||.|||::.:||
  Rat    74 RLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMF 138

  Fly   155 DNGSFLRRRRRFKKKDV------MREKEEAIKRQAMMNEKLAEMKPLKLMTNGILEAKHMAAHAA 213
            ::|||||||:|||:.|:      |.:...|....|      |.:.|      |.:.|...|...|
  Rat   139 ESGSFLRRRKRFKRSDLSTYPAYMHDAAAAAAAAA------AAIFP------GAVPAARPAYPGA 191

  Fly   214 HF-----------------------------KKEPLM-DLGCLSGKEVSHAAMLNSCHDSLAQMN 248
            .:                             .:.||. |||      .:.:|...||  :.|...
  Rat   192 VYAGYAPPLAAPPPVYYPAASPGPCRVFGLVPERPLSPDLG------PAPSAAGGSC--AFAAAA 248

  Fly   249 HLAGGGVEHPGFTVDSLMNVYNPRIHHSAY--PYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQ 311
            ...|.|...|.....:  ...||..:.:||  |    :......|||.:    .||||       
  Rat   249 GAPGTGSFQPAVCTGA--RPVNPAAYAAAYAGP----DGAYPQGASSAL----FAAAA------- 296

  Fly   312 RHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTPETPPSEPVPHNGQQGTPTHPGH 376
               ..:|.|.:|   .|||.|.|...|.          .:|...:|        ||.|....|.:
  Rat   297 ---GRLAGPTSP---TAGGGSGGVEATV----------DFYGRTSP--------GQFGAALGPCY 337

  Fly   377 NNNNSSSVLNHNGVGNGGGGGGGGGGGSSSVLTSSP 412
            |             .:|..|.||||...|...|:.|
  Rat   338 N-------------PSGQLGAGGGGAYHSRHATAYP 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 55/85 (65%)
Foxe1NP_620264.1 FH_FOXE 54..142 CDD:410793 55/87 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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