DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and fkh-2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_508644.1 Gene:fkh-2 / 180663 WormBaseID:WBGene00001434 Length:270 Species:Caenorhabditis elegans


Alignment Length:113 Identity:61/113 - (53%)
Similarity:84/113 - (74%) Gaps:3/113 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            |||:||.|||.|||:::.:|::||.|||:||:..:|:|||||||||||||||||||:|||||.|:
 Worm    93 KPPFSYNALIMMAIKDSPEKRLTLAGIYEYIVTNYPFYRDNKQGWQNSIRHNLSLNKCFVKVPRN 157

  Fly   135 DKKPGKGSYWTLDPDSYN-MFDNGSFLRRRRRFKKKDVMREKEEAIKR 181
            ...||||:||.||..:.: :|..|:..:.|||  ...:.|.:.:|.|:
 Worm   158 FDDPGKGNYWMLDATAEDEVFIGGATGKLRRR--PSSLSRARMDAYKQ 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 55/89 (62%)
fkh-2NP_508644.1 FH_FOXG 93..171 CDD:410795 52/77 (68%)

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