DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxc1

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_032618.2 Gene:Foxc1 / 17300 MGIID:1347466 Length:553 Species:Mus musculus


Alignment Length:515 Identity:197/515 - (38%)
Similarity:251/515 - (48%) Gaps:100/515 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YGSASAVAAASSASAAAA-----AHYAYDQYSRYPYS-ASAYGLGAPH-QNKEIVKPPYSYIALI 79
            |..|:|.||....:|..|     :|.|:.:  :||.| |.|||...|. |.|::|||||||||||
Mouse    25 YYRAAAAAAGGGYTAMPAPMSVYSHPAHAE--QYPGSMARAYGPYTPQPQPKDMVKPPYSYIALI 87

  Fly    80 AMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYW 144
            .||||||.|||:|||||||:||:|||:|||||||||||||||||||||||||.||||||||||||
Mouse    88 TMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYW 152

  Fly   145 TLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMTNGILEAKHMA 209
            ||||||||||:|||||||||||||||.:::|||..:..      |.|..|.:............|
Mouse   153 TLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKGRLH------LQEPPPPQAGRQPAPAPPEQA 211

  Fly   210 AHAAHFKKEP---LMDLGCLSG------KEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDSL 265
            ..:|...:.|   :.|:...:|      :.:|.||.|.|  .|.|.:..     :|.|..:..||
Mouse   212 EGSAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGS--GSAATVPK-----IESPDSSSSSL 269

  Fly   266 MNVYN-PRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGGQGAG 329
            .:..: |....||.|..|:       |:........|...||:|...  |.::...|....||:.
Mouse   270 SSGSSPPGSLPSARPLSLD-------AAEPAPPPQPAPPPHHSQGFS--VDNIMTSLRGSPQGSA 325

  Fly   330 GQ-SSGHSPTTISTPHG----PAHGGWYTPETPPSEPVPHNGQQGTPTHPGHNNNNSSSVLNHNG 389
            .: .||...:..::...    |...|.|:|           ||....:.|   .:.|||.    |
Mouse   326 AELGSGLLASAAASSRAGIAPPLALGAYSP-----------GQSSLYSSP---CSQSSSA----G 372

  Fly   390 VGNGGGGGGGGGGGSSSVLTSSPTSALGFRDMIFEQNQSCQLDTGS-------------PTGSLQ 441
            ...||||||||||||||...:...:           ...|.|...|             |.|...
Mouse   373 SSGGGGGGGGGGGGSSSAAGTGGAA-----------TYHCNLQAMSLYAAGERGGHLQGPAGGAG 426

  Fly   442 SAS----------PPASASVAAASAAAAAAVISSHHHHHHHHAALSGNLGQLGQLSNLSH 491
            ||:          |||::|.:::.:.......:|||...|.....|..|.|.|  .:|.|
Mouse   427 SAAVDDPLPDYSLPPATSSSSSSLSHGGGGQEASHHPASHQGRLTSWYLNQAG--GDLGH 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 81/89 (91%)
Foxc1NP_032618.2 Required for transcriptional activation. /evidence=ECO:0000250|UniProtKB:Q12948 1..51 8/25 (32%)
FH_FOXC1 73..165 CDD:410818 80/91 (88%)
Nuclear localization signal 1 (NLS 1). /evidence=ECO:0000250|UniProtKB:Q12948 78..93 13/14 (93%)
Nuclear localization signal 2 (NLS 2). /evidence=ECO:0000250|UniProtKB:Q12948 168..176 7/7 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..326 42/174 (24%)
Required for transcriptional inhibition. /evidence=ECO:0000250|UniProtKB:Q12948 217..366 37/178 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..393 21/43 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 420..466 11/45 (24%)
Required for transcriptional activation. /evidence=ECO:0000250|UniProtKB:Q12948 466..553 7/21 (33%)

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