DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxc2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001095150.1 Gene:Foxc2 / 171356 RGDID:621703 Length:494 Species:Rattus norvegicus


Alignment Length:526 Identity:186/526 - (35%)
Similarity:232/526 - (44%) Gaps:145/526 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SDQNSFTRHYAQTAAGYGSASAVAAASSASAAAAAHYAYDQYSRYPYSASAYGLG-----APHQN 65
            |:||     |.:.|..||..::....               ||.:|   ..||.|     ||:.:
  Rat    20 SEQN-----YYRAAGSYGGMASPMGV---------------YSGHP---EQYGAGMGRSYAPYHH 61

  Fly    66 -----KEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLN 125
                 |::|||||||||||.||||||.:||:|||||||:||:|||:||:||||||||||||||||
  Rat    62 QPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLN 126

  Fly   126 ECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLA 190
            ||||||.||||||||||||||||||||||:||||||||||||||||.::|||        ...|.
  Rat   127 ECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDKEE--------RAHLK 183

  Fly   191 EMKPLKL--------MTNGILEA------KHMAAHAA---HFKKEPLMDLGCLSGKEVSHAAM-L 237
            |..|...        :.:|..||      |..||..|   ..|.|.|...|.|.....|.|:. .
  Rat   184 EPPPASAKGAPTGTPVADGPKEAEKKVVVKSEAASPALPVITKVETLSPEGALQASPRSSASTPA 248

  Fly   238 NSCHDSLAQMNHLAGGGVEHPGFTVDSLMNV--------YNPRIHHS-------AYPYHLNEDNL 287
            .|...||.:.:..|..|:  |||:|:::|.:        .:|....:       |.||.....  
  Rat   249 GSPDGSLPEHHAAAPNGL--PGFSVETIMTLRTSPPGGDLSPAAARAGLVVPPLALPYAAAPP-- 309

  Fly   288 ATVASSQMHHVHHAAAAHHAQQLQ--------RHVAHVA-----------HPLTPGGQ-GAGGQS 332
            |..|......:..|.:|.:...::        ...|||.           ||..||.. ||...:
  Rat   310 AAYAQPCAQGLEAAGSAGYQCSMRAMSLYTGAERPAHVCVPPALDEALSDHPSGPGSPLGALNLA 374

  Fly   333 SGHSPTTISTPHGPAHGGWYTPETPPSEPVPHNGQQGTPTHPGHNNNNSSSVLNHNGVGNGGGGG 397
            :|......::.|...|.....|:.||..|.|       |..|......:|..|||          
  Rat   375 AGQEGALGASGHHHQHHSHLHPQAPPPAPQP-------PPAPQPATQATSWYLNH---------- 422

  Fly   398 GGGGGGSSSVL------TSSPT-----------------SALGFRDMIFEQNQSCQLDTGSPTGS 439
                ||..|.|      |...|                 |.||...:   .|.||||...:....
  Rat   423 ----GGDLSHLPGHTFATQQQTFPNVREMFNSHRLGLDNSTLGESQV---SNASCQLPYRATPSL 480

  Fly   440 LQSASP 445
            .:.|:|
  Rat   481 YRHAAP 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 79/89 (89%)
Foxc2NP_001095150.1 FH_FOXC1 66..158 CDD:410818 78/91 (86%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..213 16/54 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..267 9/35 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..422 11/48 (23%)

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