DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and Foxb2

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_032049.1 Gene:Foxb2 / 14240 MGIID:1347468 Length:428 Species:Mus musculus


Alignment Length:473 Identity:135/473 - (28%)
Similarity:169/473 - (35%) Gaps:215/473 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            |||||||:|.|||||::|:|.:.|:.||::|||||||||::.|.||||:|||||.|:||:|:.|.
Mouse    13 KPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNLSFNDCFIKIPRR 77

  Fly   135 DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMT 199
            ..:|||||:|.|.||..:||:||||||||:|||                                
Mouse    78 PDQPGKGSFWALHPDCGDMFENGSFLRRRKRFK-------------------------------- 110

  Fly   200 NGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDS 264
              :|.|.|...|:...|..|                             ....||..||      
Mouse   111 --VLRADHAHLHSGSSKGAP-----------------------------GTGPGGHLHP------ 138

  Fly   265 LMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGGQGAG 329
                     ||..:.:|              ||.||..||||      |  |..||..|      
Mouse   139 ---------HHPHHAHH--------------HHHHHHHAAHH------H--HHHHPPQP------ 166

  Fly   330 GQSSGHSPTTISTPHGPAHGGWYTPETPPSEPVPHNGQQGTPT-HPGHNNNNSSSVLNHNGVGNG 393
                                    |..||...||:..||..|. .|.|                 
Mouse   167 ------------------------PPPPPPHMVPYFHQQPAPAPQPPH----------------- 190

  Fly   394 GGGGGGGGGGSSSVLTSSPTSALGFRDMIFEQNQSCQLDTGSPTGSLQSASPPASASVAAA---- 454
                          |.|.|...        .|.||....|..| |.:|.|:..|:|:.|||    
Mouse   191 --------------LPSQPAQQ--------PQPQSQPPQTSHP-GKMQEAAAVAAAAAAAAAAAV 232

  Fly   455 ---------------SAAAAAAVISSHHHHHHHHAALSGNLGQ---------------------- 482
                           |||||||..::......|..|:...:|:                      
Mouse   233 GSVGRLSQFPPYGLGSAAAAAAAAAASTTGFKHPFAIENIIGRDYKGVLQAGGLPLASVMHHLGY 297

  Fly   483 --LGQLSN-LSHYRPHVG 497
              .||||| :....||||
Mouse   298 PVPGQLSNVVGSVWPHVG 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 53/85 (62%)
Foxb2NP_032049.1 FH 13..101 CDD:214627 54/87 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 118..217 43/234 (18%)
E_Pc_C <342..>406 CDD:284226
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 408..428
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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