DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment croc and Foxf2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_034355.2 Gene:Foxf2 / 14238 MGIID:1347479 Length:446 Species:Mus musculus


Alignment Length:502 Identity:138/502 - (27%)
Similarity:194/502 - (38%) Gaps:170/502 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TAAGYGSASAVAAASSASAAAAAHYAYDQYSRYPYSASAYGLGAPHQN--------KEIVKPPYS 74
            |::...|:||..|:||:::.:|:..|...      :||:.|.||....        :...|||||
Mouse    46 TSSSSSSSSASCASSSSNSVSASAGACKS------AASSGGAGAGSGGTKKATSGLRRPEKPPYS 104

  Fly    75 YIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPG 139
            |||||.||||::..|::||:.|||::..|||::|...|||:||:||||||||||:|:.:...:||
Mouse   105 YIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPG 169

  Fly   140 KGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPL-KLMTNGIL 203
            ||.|||:||.|..||:.|||.||.|.|::                   |...:||: ..:.:|:.
Mouse   170 KGHYWTIDPASEFMFEEGSFRRRPRGFRR-------------------KCQALKPMYHRVVSGLG 215

  Fly   204 EAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDSLMNV 268
            ....:......|:..|...|||..........|:.:.:|:        |.|.  ||         
Mouse   216 FGASLLPQGFDFQAPPSAPLGCHGQGGYGGLDMMPAGYDT--------GAGA--PG--------- 261

  Fly   269 YNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGGQGAGGQSS 333
                   .|:|                ||:||           .||.|::               
Mouse   262 -------HAHP----------------HHLHH-----------HHVPHMS--------------- 277

  Fly   334 GHSPTTISTPHGPAHGGWYTPETPPSEPVPHNGQQGTPTHPGHNNNNSSSVLNHNGVGNGGGGGG 398
                        |..|..|....|            .|..|.             |||...||||
Mouse   278 ------------PNPGSTYMASCP------------VPAGPA-------------GVGAAAGGGG 305

  Fly   399 GGG----GGSSSVLTSSPTSALGFRDMIFEQNQSCQLDTGSPTG--SLQSASP---------PAS 448
            |||    ..|||.:.|||..|...         .|.....||..  |...|||         |:|
Mouse   306 GGGDYGPDSSSSPVPSSPAMASAI---------ECHSPYTSPAAHWSSPGASPYLKQPPALTPSS 361

  Fly   449 ASVAAASAAAAAAVISSHHHHHHHHAALSGNLGQLGQLSNLSHYRPH 495
            ...|:|....:.:..|....:.|.:|....::|       |..|:.|
Mouse   362 NPAASAGLHPSMSSYSLEQSYLHQNAREDLSVG-------LPRYQHH 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 53/89 (60%)
Foxf2NP_034355.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..97 14/56 (25%)
FH_FOX 101..199 CDD:469596 58/116 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..278 12/92 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..325 11/20 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 340..371 8/30 (27%)

Return to query results.
Submit another query.