DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxd4

DIOPT Version :9

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_032048.1 Gene:Foxd4 / 14237 MGIID:1347467 Length:444 Species:Mus musculus


Alignment Length:513 Identity:138/513 - (26%)
Similarity:183/513 - (35%) Gaps:192/513 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QNSFTRHYAQTAAGYGSASAVAAASSASAAAAAHYAYDQYSRYPYSASAYGLGAPHQNKEIVKPP 72
            :.|..|..|:|.|| .||......|::|.......|    .|.|.:.:|.|       .:..|||
Mouse    53 ERSLQRPGARTLAG-RSAGDCGDLSNSSGFLRKFRA----PRTPATTTADG-------PQPAKPP 105

  Fly    73 YSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKK 137
            |||||||.|||..:..|::||:||..:|..||||||.....||||||||||||:||||:.|:...
Mouse   106 YSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGH 170

  Fly   138 PGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMTNGI 202
            ||||:||:|||.|.:|||||||||||:|||:                                  
Mouse   171 PGKGNYWSLDPASQDMFDNGSFLRRRKRFKR---------------------------------- 201

  Fly   203 LEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEH---PGFTVDS 264
                                                         :|...||..|   |...|.:
Mouse   202 ---------------------------------------------HHPPSGGHPHCPFPPPAVPA 221

  Fly   265 LMNVYNPR--IHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGGQG 327
            .::|..|.  :.:||.|    :.||               |||.|...:.|.....||       
Mouse   222 TLHVSQPSLLLRYSAPP----QPNL---------------AAHPAAPPRSHPCAPLHP------- 260

  Fly   328 AGGQSSGHSPTTISTPHGPAHGG------WYTPETP----------PSEPVPHNGQQGTPTHPGH 376
                    .|........||:|.      ...|.||          .|:|...:...||.:..|.
Mouse   261 --------HPMRYLLLAAPAYGDNPRKAEGADPATPLAIPALQPVLGSQPWERDQSSGTRSGRGC 317

  Fly   377 NNNNSSSVLNHNGVGNGGGGGGGGGGGSSSVLTSSPTSALGFRDMIFEQNQSC-----------Q 430
            .:....|::.         |..|||.||:...:.:|.|   :..::  |:..|           .
Mouse   318 ASFTIESIMQ---------GVTGGGTGSAQSPSFAPWS---YCHLL--QHPPCLLHPQAASPLFH 368

  Fly   431 LDTGSPTGSLQSASPPASASVAAASAAAAAAVISSHHHHHHHHAALS---GNLGQLGQ 485
            :..||.|...|...||...                  ....||.|:|   |...:|||
Mouse   369 MSAGSRTILPQQPQPPLPL------------------QQEQHHCAISCAPGKGVRLGQ 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 Forkhead 70..156 CDD:278670 54/85 (64%)
Foxd4NP_032048.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 7/17 (41%)
Forkhead 103..189 CDD:278670 54/85 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 234..256 10/40 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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