DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxn2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_851305.2 Gene:Foxn2 / 14236 MGIID:1347478 Length:429 Species:Mus musculus


Alignment Length:252 Identity:70/252 - (27%)
Similarity:111/252 - (44%) Gaps:57/252 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PHQNKEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNE 126
            |.:.....|||||:..||.|||:::.:|.:.:..||.:|::||||:.....||:||:|||||||:
Mouse   104 PEKKSATSKPPYSFSLLIYMAIEHSPNKCLPVKEIYSWILDRFPYFATAPTGWKNSVRHNLSLNK 168

  Fly   127 CFVKVARD-DKKPGKGSYWTLDPD-SYNMFDNGSFLRRR----------------RRFKKKDVMR 173
            ||.||.|. .|..||||.|.:||: ..|:.   ..|:::                ...|:..|..
Mouse   169 CFQKVERSHGKVNGKGSLWCVDPEYKPNLM---QALKKQPFSSPQSAALSPHCLSSALKQSQVQT 230

  Fly   174 EKE---EAIKRQAMMNEKLAE-----MKPLKLMTNGILEAKH------MAAHAAHFKKEPLMDLG 224
            .:|   :|.....::|..:.:     .|||.|.|:  |:.|.      .|..|...::.|....|
Mouse   231 LQESDIDAATAMILLNTSIEQEILECEKPLPLKTS--LQKKRSYGSAFSAPGAVRLQESPSPTAG 293

  Fly   225 ------------------CLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVD 263
                              |.|...:|..:.::..::.:.:.:|  ||.....||..|
Mouse   294 IDPKADHNYSANSVAAQRCASRASMSSLSSVDEVYEFIPKSSH--GGSDGSEGFHSD 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 43/91 (47%)
Foxn2NP_851305.2 FH_FOXN2 111..192 CDD:410832 41/80 (51%)

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