DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxc2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_038547.2 Gene:Foxc2 / 14234 MGIID:1347481 Length:494 Species:Mus musculus


Alignment Length:531 Identity:186/531 - (35%)
Similarity:236/531 - (44%) Gaps:155/531 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SDQNSFTRHYAQTAAGYGSASAVAAASSASAAAAAHYAYDQYSRYPYSASAYGLG-----APHQN 65
            |:||     |.:.|..||..::....               ||.:|   ..||.|     ||:.:
Mouse    20 SEQN-----YYRAAGSYGGMASPMGV---------------YSGHP---EQYGAGMGRSYAPYHH 61

  Fly    66 -----KEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLN 125
                 |::|||||||||||.||||||.:||:|||||||:||:|||:||:||||||||||||||||
Mouse    62 QPAAPKDLVKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLN 126

  Fly   126 ECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNE--- 187
            ||||||.||||||||||||||||||||||:||||||||||||||||.::|||    :|.:.|   
Mouse   127 ECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVPKDKEE----RAHLKEPPS 187

  Fly   188 ----------------KLAEMKPLKLMTNGILEAKHMAAHAA---HFKKEPLMDLGCLSGKEVSH 233
                            |.||.|         :..|..||..|   ..|.|.|...|.|.....|.
Mouse   188 TTAKGAPTGTPVADGPKEAEKK---------VVVKSEAASPALPVITKVETLSPEGALQASPRSA 243

  Fly   234 AAM-LNSCHDSLAQMNHLAGGGVEHPGFTVDSLMNV--------YNPRIHHS-------AYPYHL 282
            ::. ..|...||.:.:..|..|:  |||:|:::|.:        .:|....:       |.||..
Mouse   244 SSTPAGSPDGSLPEHHAAAPNGL--PGFSVETIMTLRTSPPGGDLSPAAARAGLVVPPLALPYAA 306

  Fly   283 NEDNLATVASSQMHHVHHAAAAHHAQQLQ--------RHVAHVA-----------HPLTPGGQ-G 327
            ......|...:|  .:..|.:|.:...::        ...|||.           ||..||.. |
Mouse   307 APPAAYTQPCAQ--GLEAAGSAGYQCSMRAMSLYTGAERPAHVCVPPALDEALSDHPSGPGSPLG 369

  Fly   328 AGGQSSGHSPTTISTPHGPAHGGWYTPETPPSEPVPHNGQQGTPTHPGHNNNNSSSVLNHNGVGN 392
            |...::|......::.|...|.|...|:.||..|.|       |..|......:|..|||     
Mouse   370 ALNLAAGQEGALGASGHHHQHHGHLHPQAPPPAPQP-------PPAPQPATQATSWYLNH----- 422

  Fly   393 GGGGGGGGGGGSSSVL------TSSPT-----------------SALGFRDMIFEQNQSCQLDTG 434
                     ||..|.|      |...|                 |:||...:   .|.||||...
Mouse   423 ---------GGDLSHLPGHTFATQQQTFPNVREMFNSHRLGLDNSSLGESQV---SNASCQLPYR 475

  Fly   435 SPTGSLQSASP 445
            :.....:.|:|
Mouse   476 ATPSLYRHAAP 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 79/89 (89%)
Foxc2NP_038547.2 FH_FOXC1 66..158 CDD:410818 78/91 (86%)
COG5025 71..>251 CDD:227358 111/192 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..213 16/59 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 233..267 8/35 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..422 12/47 (26%)

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