DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and Foxj1

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_446284.2 Gene:Foxj1 / 116557 RGDID:621764 Length:421 Species:Rattus norvegicus


Alignment Length:346 Identity:92/346 - (26%)
Similarity:133/346 - (38%) Gaps:104/346 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GYGSASAVAAASSASAAAAAHYAYDQYSRYPYS-----ASAYGLGAP------HQNKEIVKPPYS 74
            ||.....:.|..|..||..|..........|.|     ::..||.||      :.....||||||
  Rat    61 GYHQVPGLVAPGSPLAADPACLGQPHTPGKPTSSCTSRSAPPGLQAPPPDDVDYATNPHVKPPYS 125

  Fly    75 YIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARDDKKPG 139
            |..||.||:|.:...|:||:.||::|.:.|.|:|.....||||||||||||:||:||.|:..:||
  Rat   126 YATLICMAMQASKATKITLSAIYKWITDNFCYFRHADPTWQNSIRHNLSLNKCFIKVPREKDEPG 190

  Fly   140 KGSYWTLDPDSYNMFDNGSFLRRRR----------------------------RFKKKDVMREKE 176
            ||.:|.:||.......:|:|.:||.                            ..:.:.:::|.|
  Rat   191 KGGFWRIDPQYAERLLSGAFKKRRLPPVHIHPAFARQAAQEPSTAPWGGPLTVNREAQQLLQEFE 255

  Fly   177 EAI---------------------KRQA----------MMNEKLAEMKPLKLMTNGILEAKHMAA 210
            ||.                     ||.|          :..|:..|::|||              
  Rat   256 EATGEGGWGTGEGRLGHKRKQPLPKRVAKVLRPPSTLLLTQEEQGELEPLK-------------- 306

  Fly   211 HAAHFKKEPLMDLGCLSGKEVSHAAMLN-------SCHDSLAQMNHLAGGGVEHPGFTVDSLMNV 268
              .:|..|.:.:.|.| |:|:|....|.       |.|..:....|  |..:..|.        .
  Rat   307 --GNFDWEAIFEAGAL-GEELSSLEGLELSPPLSPSSHGEVDLTVH--GRHINCPA--------T 358

  Fly   269 YNPRIHHSAYPYHLNEDNLAT 289
            :.|.:..:......:|..|||
  Rat   359 WGPPVEQATDSLDFDETFLAT 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 46/89 (52%)
Foxj1NP_446284.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..110 7/30 (23%)
FH_FOXJ1 121..199 CDD:410797 42/77 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..277 2/20 (10%)
Blue background indicates that the domain is not in the aligned region.

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