DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxm1

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_002941428.1 Gene:foxm1 / 100492241 XenbaseID:XB-GENE-854081 Length:754 Species:Xenopus tropicalis


Alignment Length:480 Identity:109/480 - (22%)
Similarity:173/480 - (36%) Gaps:164/480 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRD-NKQGWQNSIRHNLSLNECFVKVAR 133
            :|||||:|||..||.:...|::||..||.:|.:.|||::. .|.||:|||||||||::.||   |
 Frog   262 RPPYSYMALIQFAINSTPRKRMTLKDIYTWIEDHFPYFKHVAKPGWKNSIRHNLSLHDMFV---R 323

  Fly   134 DDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFK-------------KKDVMREKEEAIKRQAMM 185
            :.:...|.||||:.|.:      ...|...:.||             :|.::.:..::::..|..
 Frog   324 ESEANNKVSYWTIHPQA------NRCLTLDQVFKTAVSMSPADDEPQQKKMIPDIRKSLQSAAYA 382

  Fly   186 NEKLAEMKPLKLMTNGILEAKHMAAHAAHFKKEPLM---------DLGCL----SGKEVSHAAML 237
            :.|..:||||....|..|...|...      .:|::         :..||    |.|.|..|.  
 Frog   383 SNKERKMKPLLPRVNSYLIPVHFPV------AQPVLLPATEPYAYEAECLDRHQSSKRVKIAP-- 439

  Fly   238 NSCHDSLAQMNHLAGGGV-EHPGFT---------------------------------------V 262
            .:..|:.....::....| |.|..|                                       .
 Frog   440 KAAADNGESPQYIEPRSVKEEPEITDLNGDVPFRYKQAGSSRRKQQLLPPRSEEPELVLPESSAS 504

  Fly   263 DSLMNV---------YNPRIHHSAY-----PYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRH 313
            ||.::.         .:|..:||::     |::|.::.|:.:|.....::...:.:|..|....:
 Frog   505 DSGLDTDFSFLQDTSAHPSRNHSSHPTQNGPFNLTQEGLSHLAQEGPSYLTQVSFSHFTQDDTSY 569

  Fly   314 VAHVAHPL-----------TPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTP-ETP---PSEPV- 362
            :.. .:|:           ||      .:.....|...|||..|...|...| ||.   |.:|| 
 Frog   570 LTQ-ENPIQITQDEDYTFKTP------IKDRFSKPPASSTPSKPTDTGLLQPSETEVCLPRDPVL 627

  Fly   363 ---PHNGQQGTPTHPGHNNNNSSSVLNHNGVGNGGGGGGGGGGGSSSVLTSSPTSALGFRDM-IF 423
               |....||:...|..:|..:.|                        ...:|     |:|. :|
 Frog   628 DFSPVRIPQGSTFTPFKDNLGTLS------------------------FGDTP-----FKDFGLF 663

  Fly   424 EQNQSCQLDTGSPTGSLQSASPPAS 448
                      |||...|.:.||.||
 Frog   664 ----------GSPQNLLNTLSPAAS 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 40/89 (45%)
foxm1XP_002941428.1 FH_FOXM 262..338 CDD:410803 39/78 (50%)

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