DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxl2

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_004917868.1 Gene:foxl2 / 100486124 XenbaseID:XB-GENE-486612 Length:326 Species:Xenopus tropicalis


Alignment Length:311 Identity:107/311 - (34%)
Similarity:143/311 - (45%) Gaps:95/311 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            ||||||:|||||||:.:|:|::||:.|||||:.:||:|..||:||||||||||||||||:||.|:
 Frog    70 KPPYSYVALIAMAIRESAEKRLTLSAIYQYIISKFPFYEKNKKGWQNSIRHNLSLNECFIKVPRE 134

  Fly   135 DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMT 199
            .....||:||||||...:||:.|:: |||||.|:                      ..:|     
 Frog   135 GGGERKGNYWTLDPACEDMFEKGNY-RRRRRMKR----------------------PFRP----- 171

  Fly   200 NGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQ----MNH----LAGGGVE 256
                ...|..|..:.|..:   ..|.||..:...:..:|:.. .|||    |::    :|||.|.
 Frog   172 ----PPTHFQAGKSLFSSD---TYGYLSPPKYLQSTFMNNSW-PLAQPPAPMSYTSCQMAGGNVS 228

  Fly   257 HPGFTVDSLMNVYNP--RIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAH 319
            .......|..:.|:|  |:...:.|..:|..|    ..|..||.|    |||||||         
 Frog   229 PVNVKGLSASSSYSPYSRVQSMSLPSMVNSYN----GMSHHHHPH----AHHAQQL--------- 276

  Fly   320 PLTPGGQGAGGQSSGHSPTTISTPHGPAHGGWYTPETPPSEPVPHNGQQGT 370
                                  :|..||          |:.|.|.||.|.|
 Frog   277 ----------------------SPASPA----------PAPPAPPNGVQFT 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 57/88 (65%)
foxl2XP_004917868.1 FH_FOXL2 70..158 CDD:410802 56/87 (64%)

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