DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxn2a

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_073776450.1 Gene:foxn2a / 100330010 ZFINID:ZDB-GENE-110810-1 Length:406 Species:Danio rerio


Alignment Length:304 Identity:76/304 - (25%)
Similarity:127/304 - (41%) Gaps:79/304 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 SASAYGLGAPHQNKEIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNS 117
            ||:|:|     ::....|||:|:..||.|||:.:..|.:.:..||.:|:|.|||:.....||:||
Zfish    97 SAAAHG-----EDSVKSKPPFSFSLLIYMAIEQSPSKSLPVKDIYGWILEHFPYFSSAPTGWKNS 156

  Fly   118 IRHNLSLNECFVKVARD-DKKPGKGSYWTLDPDSYN----------------------MFDNGSF 159
            :|||||||:||.||.:. .|..||||.|.:||: |.                      .|...:|
Zfish   157 VRHNLSLNKCFRKVEKSLGKVNGKGSLWCVDPE-YRPNLIQALKKQHFPTAHSFCTPPAFPPSAF 220

  Fly   160 LRRRRRFKKKDVMREKE-EAIKRQAMMN-------------EKLAEMKPLKLMTNGILEAKH-MA 209
            ...|:.|.:...::|.: :|.....::|             ..:...:|..::.:...:..| .:
Zfish   221 SPTRQLFLQGCSLKESDIDAATAMMLLNSAPGHHTDPCDPDSPIDLSRPDSVLVSSDPKQDHNYS 285

  Fly   210 AHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGF-------------- 260
            :.::.|::       |.|....|.::.|:|..::..:.......|.|  ||              
Zfish   286 SSSSSFQR-------CSSRSSSSSSSSLSSLDEAGCETGQAHRDGSE--GFHSEEDSEEERNPRL 341

  Fly   261 --------TVDSLMNVYNPRIHHSAYPYHLNEDNLATVASSQMH 296
                    ||...:.|.:||....|   .|:|: |...|.|.:|
Zfish   342 MPVHRRPLTVKCPLPVKSPRYEVKA---ELDEE-LKEAAGSLLH 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 42/112 (38%)
foxn2aXP_073776450.1 None

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