DRSC/TRiP Functional Genomics Resources

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Protein Alignment croc and foxg1d

DIOPT Version :10

Sequence 1:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001116096.1 Gene:foxg1d / 100142648 ZFINID:ZDB-GENE-080305-12 Length:316 Species:Danio rerio


Alignment Length:408 Identity:113/408 - (27%)
Similarity:155/408 - (37%) Gaps:157/408 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFVKVARD 134
            |||:||.|||.|||:.:.:|::||||||::||:.||:||::|||||||||||||||:|||||.|.
Zfish    62 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPFYREHKQGWQNSIRHNLSLNKCFVKVPRH 126

  Fly   135 DKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVMREKEEAIKRQAMMNEKLAEMKPLKLMT 199
            ...||||:||.|||.|.::|..|:..:.||                |.|....|||..:.|:...
Zfish   127 YDDPGKGNYWMLDPSSDDVFIGGTTGKLRR----------------RSATSRGKLAIKRGLRFSP 175

  Fly   200 NGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAMLNSCHDSLAQMNHLAGGGVEHPGFTVDS 264
            .|:......|.:..:::..||:.|                                         
Zfish   176 LGLHGITETANNPLYWQLSPLLSL----------------------------------------- 199

  Fly   265 LMNVYNPRIHHSAYPYHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRHVAHVAHPLTPGGQGAG 329
                     ||    :|              ||.|:...:|                     |..
Zfish   200 ---------HH----HH--------------HHPHYNGTSH---------------------GFL 216

  Fly   330 GQSSGHSPTTISTPHGPAHGGWYTPETPPSEPVPHNGQQGTPTHPGHNNNNSSSVLNHNGVGNGG 394
            .|:.|:.    |..||                |.|.|.:..|          .:||        |
Zfish   217 NQAHGYG----SFVHG----------------VEHLGSREAP----------RAVL--------G 243

  Fly   395 GGGGGGGGGSSSVLTSSPTSALGFRDMIFEQNQSCQLDTGSPTGSLQSASPPASASVAAASAAAA 459
            |..|..|..:...::|||...|.....:... ...|...|:|. ||::|..|.:.:.|||..|.|
Zfish   244 GSSGALGLSNGYGMSSSPVGLLSVPSGLLPA-PGLQSALGAPQ-SLRTALGPFTPTGAAALPALA 306

  Fly   460 AAVISSHHHHHHHHAALS 477
                        ||..||
Zfish   307 ------------HHDRLS 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
crocNP_524202.1 FH_FOX 69..159 CDD:469596 57/88 (65%)
foxg1dNP_001116096.1 FH_FOXG 62..140 CDD:410795 52/77 (68%)

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